Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amtr12g00480 | ATGGATGACGAGACACGTGATGTGAAGCTGGAGGTCATGGACAGCAGTAGCAGTAGCAATGGCGGTGGAGTTATGTCATATGATATGGTGTTACGTACGATGGCCTTTTGCTTTACCCTGGTAGCTGCGGTGGTTGCCGGTACTGACCAGGAAACAAAGAAGATTCCGATCAGAATTTCCGATAACTTTCCGCCGTTCAATGTTGCTGTCACGGCTAAGTGGCATTACATTTCTTCCACTGTATTCTTGGTTGTGGCAAATAGTGTGGCGTGTTCATACTCAATTGCTTCAATGGTACTTTCGATGAAAATGAAGATCCGAACCCATTTGGCTTTTCTCCTATCTGATGTGATCATGATGGCGTTGTTGTTCTCTGCCAACGGCGCTGCCACTGCGGTGGGCATGATCGGGCTCAATGGCAACTCTCATGCGCAATGGCACAAGGTGTGTTATATTTTCAGGAGTTATTGCCACCAGGGTGCAGCCTCCATAACCATGTCCTTCCTTGGCTCATTTGCGTTTTTATGGCTTGTGGTGTTTGCAATTTTAAACCTACATAAAAAGTCTACTTGA | 573 | 46.25 | MDDETRDVKLEVMDSSSSSNGGGVMSYDMVLRTMAFCFTLVAAVVAGTDQETKKIPIRISDNFPPFNVAVTAKWHYISSTVFLVVANSVACSYSIASMVLSMKMKIRTHLAFLLSDVIMMALLFSANGAATAVGMIGLNGNSHAQWHKVCYIFRSYCHQGAASITMSFLGSFAFLWLVVFAILNLHKKST | 190 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amtr12g00480 | 190 | PANTHER | CASP-LIKE PROTEIN 1U1 | 16 | 186 | IPR044173 | - | |
| Amtr12g00480 | 190 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Amtr12g00480 | 190 | Pfam | Casparian strip membrane protein domain | 26 | 172 | IPR006702 | - | |
| Amtr12g00480 | 190 | NCBIfam | plant integral membrane protein TIGR01569 | 29 | 184 | IPR006459 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amtr12g00480 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Amtr | Amtr-Chr12:15328108 | Amtr07g01773 | Amtr-Chr7:24638160 | transposed |