AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arla3g03376 ATGGCGGATGGAGATAATCAGTCACAGTATGTAAAGTTGAACAAAACTCAAGCGCCTATCGACGTCAACCCTGGAGAGCTTAATCAACCAATCGAAGTTCCTCAGTTAAACGTTCGCAAGTGCAATGAATGTAGGCAGCCTTTACCCGAGAGCTTTGAGCCTCCTGGTGTTGAACCTTGGTCAACTGGGATATTCGGTTGCGCTCAAGATACCGAAAGCTGCTGGACAGGGCTTTTTTGTCCATGTGTTTTATTCGGGCGCAATTACGAGAAGCTGAAAGACGACACACCTTGGACCACACCATGTGTTTGTCATGCAATTTTCGTTGAAGGGGGTATGGCACTTGCTGCAGGAACCGCGATAATTCATGGTATCGACCCCGAGACAACATTTCTCCTTTGGGAGGGGTTGCTGTTCAGTTGGTGGATGTGTGGTATATACACTGGCTTTGTTAGACAAACTTTACAGAAGAAATACCATCTTAAGAACTCGCCTAGTGATCCGTGCTTGGTGCACTGCGGTCTGCACTGGTGCGCGTTGTGCCAAGAACATAGGGAGATGAAGGGACGACTCTCTGATGATGCCGTGATGGCAATGACCGTTGTGAATGCACCTCCGGTTCAGGTGATGAAGTCTGATGGGGACTCTACTTCTGCACCATCATCCTCTGCCAATGGCAATGACCACCATTTAGAGATGCAACCATTGTAA 711 48.1 MADGDNQSQYVKLNKTQAPIDVNPGELNQPIEVPQLNVRKCNECRQPLPESFEPPGVEPWSTGIFGCAQDTESCWTGLFCPCVLFGRNYEKLKDDTPWTTPCVCHAIFVEGGMALAAGTAIIHGIDPETTFLLWEGLLFSWWMCGIYTGFVRQTLQKKYHLKNSPSDPCLVHCGLHWCALCQEHREMKGRLSDDAVMAMTVVNAPPVQVMKSDGDSTSAPSSSANGNDHHLEMQPL 236
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arla3g03376 236 PANTHER DUF614 FAMILY PROTEIN-RELATED 57 190 IPR006461 -
Arla3g03376 236 Pfam PLAC8 family 60 186 IPR006461 -
Arla3g03376 236 MobiDBLite consensus disorder prediction 210 229 - -
Arla3g03376 236 MobiDBLite consensus disorder prediction 209 236 - -
Arla3g03376 236 NCBIfam PCR-CNR family Cys-rich domain 59 188 IPR006461 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arla3g03376 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
16533 Arla2g00006 Arla3g03376
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Arla Arla-Chr11:6450340 Arla3g03376 Arla-Chr3:135197112 dispersed
Arla Arla-Chr2:126640 Arla3g03376 Arla-Chr3:135197112 wgd