Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi18g00053 | ATGTTATTGGGATTAAAGACAAAAAACAGGAAGAGCCCGTACGTCCAACTTGATTACGTTATCAATCTTGTAGAGATTAAGCCATGGCCTCCATCTCAGTCATTGAGATCACTTCGATCTGCATTGATACAATGGGAATATGGTGACAAGATTTCAGGGTCTACTAAAGCAGTTGTTCCTTCAATTGTTTCTGGTTTGAATGTTGGTGATGGTAAAATCGAATTCAATGAATCTTTTAGGCTTCATGTGACATTATTAAGGGATATGTCGATTAAGGCTGGGGACACCGAAACTTTCCAAAGGAATTGTATAGAGTTTAATTTGTACGAACCTCGAAGGGACAAAACGGTAAAAGGGCAGTTGTTGGCTACGGCAATCGTGGATTTTGCCGAGTATGGTATTGTGAAAGAGAGTTTGATGATAAGTGTGCCTATGACTTGCAAACGGACTTTTGGTAATACCGCTCAACCTATGCTCTTCTTTAAAATGCAGACTTCTGAGAGAAATAATCGTGTGAGGTCTTCATCGGGTGATGGTTTAATCAGAGAAGGATCGTTCGACAAGAACCACTCTGAGTCTGTTTCCGCTTTGATGAATGAAGAGTATGCTGAGGAAGCCGAGACTGCCTCCATTACCGATGACGATATTTCCTCGCAGTCTTCCATGGCTGCTGCTTCCTCAACCTTTGGATCCAATGGGAATTCAAGTCCTCAAAGAGAGAACGGATCTGAGGCGATATGTGGAAGCTCGGGAAAGGTTAATGATCAAGAAGTGGTGGTTCAAGAGAAAAGGGTTGCTGAATCCTTACATGAAGCAAATGCTTCATTGAAGGGAAGCTCACACACATCATCACCAGATTTGTATTCTGAAGTAATTAATGCTCGTGCCACTCTATCAAATCTACGTAACTCTAGATTCACAATGCTACCAGTGAACGCTGAATCTTACCGTGTGAAACTATCAAAGTCGTCTATTGCTAATGATGGAACAAATGAAGGGTTGAACGGAAACTCTAGAAATGACTCCTATGTCAATCTGGATGAGAAAGTTCCGGAAAGGACCACTATTGGTAAGAATGGCATCAAATCCATGGAATCTCTGGTGTATGAAGTGGACGAAAAACATTCTTGTATACGTTTAAAAAATCCGAATGCAAGTCAAAGTGAACGAGAAAGTCAAATCATTGGAGATCTTGGATCAGATGTTTTACATGCTGATAGATTAAAGAATTTGAAGTCTGTTAGTTCTTCATTGGATTCTGGTTATAGCAATGGATCAGATGTTTTACTTGAAAGATTAAAGAATTTGAAGTCAGTTAGTTCTTCATTGGATTCCGGTTTTAGTAATGGATCAGATGTTTTACTCGATAGATTAAAGAATTTGAAGCCGGTTGGCGCTTCATTGGATTCAGATTTTAGCAACGGATCTGTAAGGAGTGGCAAAGTTTTAGAGAAATTCAAAACGGTTGGTGTTCATGGTCAGAATGGAGGAAAAGATGTAAGCAAGGTACAACACTTGGAACAGAGGATACAATGTCTTGAAGACGAGCTGAGAGAAGCTGCAGCTATTGAGGTTAGTCTTTACTCGGTAGTCGCAGAGCATGGGAGTTCTGTTAATAAAGTCCATGCCCCAGCACGGCGTCTTTCTAGGCTGTACCTTCATGCATACAAAGAGAACTCTCAGTCTAGGAGAGCAACTTCAGCAAGAAGTATTGTGTCGGGATTGATTTTGGTCGCAAAAGCTTGCGGAAATGACGTTACAAGGTTGACTTTCTGGTTATCAAATGCCGTTGTACTAAGAGCAATAATACACAAATCTTTTGAGAAAGAGCAACCATCACTTTCTGCCGAACAATCAAGTAAAACGAATGCTGGGATCATTGAGAACCGAAAGAATGAGATCATATCTCAATTCAAATGGAAGAAAGAGTCTTCTATAAAAGAGAGTAGAATTGGTCTACCTGCAAATTCTAATGAATGGGAGGACCCTCGTACGGTTACTTCTATCTTGGAAAAAGTAGAATCTTGGATCTTCTCGCTCATTATTGAGTCCATCTGGTGGCAGACTCTTGCTCCTTATATGCAAACTGCAAAGGGTATCCTTAGAAGAGTTGTAGATTCAGAATCTAATAAAAAGTGTGAACCGTCACCTGGTTCATATGATCACGGGCAAGTGAACTCCTCGTTGGAGCTTTGGAAGACAGCTTTCATGGAAGTTTGTGAAAGAATTTGTCCTGTTCGAGCTGCAGGACATGATTGTGGTTGTTTGCGTATGCTATCTACGTTGATAATGAAGCAGTGTATGGGTAGATTAGATGTAGCCATGTTTAACGCTATTCTTCGGGAATCAGCTGATGAGGTTCCAACGGATCCTGTGTCGGACCCTATCAGTGATCCCATGGTTCTTCCTATTCCATCAGGGAAAGCAAGCTTTGGAGCCGGTGCACAACTGAAAAAGACGATCGGAAACTGGTCCAGATGGCTCACCGATCTATTTGGCATCGAGATCAATGACTCTTTAACAGACGAGAATGTACCTGACTACGATGAAAACATAGAAGGCTACGATACATCCTTCAACTCTTTTCATCTCCTCACTGCACTGAGTGAGCTCATGATGCTTCCAAAAGATATGCTCTTAAGCAACACGATCCGGAAAGAGGTGTGTCCTACTTTTGGTGTACCGTTAATCAAGAGGATTCTTGATAGTTTCGTCCCGGATGAGTTCTGCCCAGACCCTATTCCTGATGTGGTGCTTGAAGCCCTGGATTCAGAGGATTTACTCAAGAGCTGCGGCAAAGGTTGCGTCATCGGGTTCCCCTGTGCCGCACCTCCTATCGTATATCACCCACCTTCTGCATCTTTAATTGGATGCACCTTAGGAGACGATGGAAACCGGACTCGGTTATCACGCAGTGGATCTTCGATCCTACGAAAGTCAAATACAAGCGATGATGAACTTGATGAATTGGATTCACCGTTGACTTCGATCATCGACTCTTCTCGGATCGTAACCGCTTCAACAAAGCCGATCTGGGCGTTGAAAGATTGCGGGAGTCGCAATACCGTTAGGTATCAACTCCTTAGAGAGGTCTGGATGAACAGCGAGTAG | 3111 | 42.33 | MLLGLKTKNRKSPYVQLDYVINLVEIKPWPPSQSLRSLRSALIQWEYGDKISGSTKAVVPSIVSGLNVGDGKIEFNESFRLHVTLLRDMSIKAGDTETFQRNCIEFNLYEPRRDKTVKGQLLATAIVDFAEYGIVKESLMISVPMTCKRTFGNTAQPMLFFKMQTSERNNRVRSSSGDGLIREGSFDKNHSESVSALMNEEYAEEAETASITDDDISSQSSMAAASSTFGSNGNSSPQRENGSEAICGSSGKVNDQEVVVQEKRVAESLHEANASLKGSSHTSSPDLYSEVINARATLSNLRNSRFTMLPVNAESYRVKLSKSSIANDGTNEGLNGNSRNDSYVNLDEKVPERTTIGKNGIKSMESLVYEVDEKHSCIRLKNPNASQSERESQIIGDLGSDVLHADRLKNLKSVSSSLDSGYSNGSDVLLERLKNLKSVSSSLDSGFSNGSDVLLDRLKNLKPVGASLDSDFSNGSVRSGKVLEKFKTVGVHGQNGGKDVSKVQHLEQRIQCLEDELREAAAIEVSLYSVVAEHGSSVNKVHAPARRLSRLYLHAYKENSQSRRATSARSIVSGLILVAKACGNDVTRLTFWLSNAVVLRAIIHKSFEKEQPSLSAEQSSKTNAGIIENRKNEIISQFKWKKESSIKESRIGLPANSNEWEDPRTVTSILEKVESWIFSLIIESIWWQTLAPYMQTAKGILRRVVDSESNKKCEPSPGSYDHGQVNSSLELWKTAFMEVCERICPVRAAGHDCGCLRMLSTLIMKQCMGRLDVAMFNAILRESADEVPTDPVSDPISDPMVLPIPSGKASFGAGAQLKKTIGNWSRWLTDLFGIEINDSLTDENVPDYDENIEGYDTSFNSFHLLTALSELMMLPKDMLLSNTIRKEVCPTFGVPLIKRILDSFVPDEFCPDPIPDVVLEALDSEDLLKSCGKGCVIGFPCAAPPIVYHPPSASLIGCTLGDDGNRTRLSRSGSSILRKSNTSDDELDELDSPLTSIIDSSRIVTASTKPIWALKDCGSRNTVRYQLLREVWMNSE | 1036 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi18g00053 | 1036 | ProSiteProfiles | C2 NT-type domain profile. | 7 | 167 | IPR019448 | - | |
| Armi18g00053 | 1036 | PANTHER | NUCLEAR PORE COMPLEX PROTEIN NUP205 | 12 | 1036 | IPR021827 | GO:0005643(InterPro) | |
| Armi18g00053 | 1036 | Coils | Coil | 503 | 523 | - | - | |
| Armi18g00053 | 1036 | MobiDBLite | consensus disorder prediction | 212 | 253 | - | - | |
| Armi18g00053 | 1036 | MobiDBLite | consensus disorder prediction | 170 | 253 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi18g00053 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 18898 | Armi13g00023 | Armi18g00053 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr17:42264176 | Armi18g00053 | Armi-Chr18:691894 | dispersed | |
| Armi | Armi-Chr18:691894 | Armi1g04290 | Armi-Chr1:184684049 | dispersed | |
| Armi | Armi-Chr13:307173 | Armi18g00053 | Armi-Chr18:691894 | wgd | |
| Armi | Armi-Chr18:691894 | Armi5g01015 | Armi-Chr5:22866597 | wgd |