Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00133	ATGGAAAGATTTGGAGGTGGTGGTGGTGATACTCAACAACTTGTTGATCCTCGAGATCCTAATCAACAACTTGGTTCGAATTCCACAGGTGGTACTGTATTTGATGCATCACAGTATGCATTCTTTGGAAATGAAGTTCTTGAAGAAGTTGAGTTGGGAGGTCTGGAAGATGAAGAGGAAGACCTTCCGGCAGCAAAATTCGAGGATGAAGAGTATCAGCTGGAGCAAGAAGAGGGTGTGTTTCCAGGAATCGATGATCTTGCCACCACATTTTCAAAGCTCAACAAAGATGTCATGGGGACAAGTGTTGGAGCTTTTGGTGACCAAGGATCAAGAGGAAACTCTTCTGCAGCTGAATGGGCACAGGGAGGAGAATACACCAACTGGTTAGATCAGGATATTTTTGATGCAGAAAGTGCTCAGGATAGCAATAGATGGTCAAATCCTTCATTTCCTCTTCAAGATGCATCAATGCTTATTCACAGAACATCATCCTACCCTGAGAAACATCAACAACAGAATCTTAACCAGCAGCTGTATGATGAATCAAAGCTTTACCTTCACAGAACATCATCTTATCCCGAACAGCATCAACAACAGAACCTTAACCAGCACCTGCTAGATGAATCAAAGCATCTCCACAGAACATCGTCTTACCCTGAGCAGCAGCAACCTCACCACCTTAGTCAGCATTTGCATTTCTCTAGTGAGCCGGTTCCAGTTCCCAAATCTTCTTTCATCTCATACCCTCCACCCGGTGGTGGATCTCCTCAACCTTCAGCAAGCCATCAATTACACCATCTTAATGCTCAGTTTCATGGCAGTGGACACCAGATGCCGCCATCTTTCTCCAATATATCTCCACTGTCAAATCCACAGCTTCAGATGGGTGGGATCCCTCATGGGTCGCAATTTGGTGGGAATATGCCTCAGTTTCGTCCTCCTGCTTCATCTGTTAATAACCGGATGCCTAACCAGTGGACAGGTCAGAATAGTTTATATCCTGGAGACCAGCCCGATCTTTCAAACGGTATGTTGCAACAACAGCTTGCTCATAAGAACGGTTTGCTGCCACCACAGCAGCATAGGCTGCATCACCAGTTTCAGCCACCTTTTGGCCATTTATCTGGGTTGCAGCCCCAATTGCCCCAACTAATGAACCACCATCTATCTCCATCCCCACCACTGATGAACAATTTTGAAGTTTTTGGGATGGCTGGTCCCAGGGATCAAAGGCCTAAACCAATGCCCAAAGGTAGACCGGGCCAGAGATATCCCCAATCAGGCTTTGATACCAGTGGATGGCCACAGTTCAAATCAAAATACATGACAGCTGATGAGATTGAAAATATTCTCAGAATGCAGCTTGCTGCTACACACAGTAATGATCCTTACGTCGATGATTACTATCACCAAGCTTGCCTGGCTAACAAATCTAGCGGTGCGAAGTTGAGACACCATTTCTGCCCGACTCAGTTGAGGGATTGTCCTCCCAGAGCTCGTGCTGCTAACGAGCCACATGCTTTTCTTCAGGTTGATGCTTTGGGAAGGGTTTCTTTTTCTTCAATACGTCGGCCTCGCCCACTTCTTGAGGTCGATCCACCAAAGTCGTCTGCTAGCGGTAACACCGATCAGAAAATGTTGGATAAACCATTGGAACAAGAGCCCATGCTTGCTGCTAGAGTCACCATTGAGGATGGCATTTGTCTTCTTCTGGATGTTGATGATATTGACCGCTTTCTTCAGTTCAATCAGCTCCAAGATGGTGGAGCCCAATTAAGGCAAAGGCGACAAGTTTTACTCGAAGGATTAGCAACATCTCTTCAGCTTGTTGATCTGTTAGGCAAAAATGGTCAAACAGTAGAGTTGACACCTAAAGATGATCTTGTTTTCTTACGGTTAGTTTCTCTCCCGAAGGGCCGAAAACTTCTCTCAAGGTACCTTCAGCATCTCTCCCCTGGAAGTGAGCTAACCCGCATAGTTTGCATGGCCGTTTTTCGCCATTTAAGATTCTTGTTTGGAGGTCTTTCCTCAGATCCTGGAGCTGCAGCAACCGCTAACAATCTTGCAATAACTGTTTCATCTTCCATTCGTGGGATGGAGCTTAGAGCTCTTGCCGCCTGTCTAGCATCTGTTGTTTGTTCCACCGAGCATCCTCCACTTCGACCTGTTGGAAGTCCTGCAGGCGATGGGGCTTCCGTCGTTATAAAATCTGTACTGGAAAGAGGAACCGAACTCTTAACCGACCCACATGCCGTCAGTAACTGCAGCATGCCTAATAGGGCGTTTTGGCAGGCCTCCTTCGATGCTTTCTTTGGACTTCTGACCAAATACTGTTTTAGTAAATATGATACTGTTGTCCAATCGTTGCTGACACAGGGAGGTGGTCCAACCGATATGGCAGTTGTTGGATCGGATGCTGCAAAAGCCATTAGCTGGGAAATGCCCGTTGAACTCTTGCGTGCGAGCCTTCCTCATACGAACGAAAACCAGAGGAAACTACTACTGGATTTTGCTCAACGATCCATGCCTGTGCTCGGAATGAATAGCGGTGGGGCAGGAAATGGTGGCACTTGA	2577	46.57	MERFGGGGGDTQQLVDPRDPNQQLGSNSTGGTVFDASQYAFFGNEVLEEVELGGLEDEEEDLPAAKFEDEEYQLEQEEGVFPGIDDLATTFSKLNKDVMGTSVGAFGDQGSRGNSSAAEWAQGGEYTNWLDQDIFDAESAQDSNRWSNPSFPLQDASMLIHRTSSYPEKHQQQNLNQQLYDESKLYLHRTSSYPEQHQQQNLNQHLLDESKHLHRTSSYPEQQQPHHLSQHLHFSSEPVPVPKSSFISYPPPGGGSPQPSASHQLHHLNAQFHGSGHQMPPSFSNISPLSNPQLQMGGIPHGSQFGGNMPQFRPPASSVNNRMPNQWTGQNSLYPGDQPDLSNGMLQQQLAHKNGLLPPQQHRLHHQFQPPFGHLSGLQPQLPQLMNHHLSPSPPLMNNFEVFGMAGPRDQRPKPMPKGRPGQRYPQSGFDTSGWPQFKSKYMTADEIENILRMQLAATHSNDPYVDDYYHQACLANKSSGAKLRHHFCPTQLRDCPPRARAANEPHAFLQVDALGRVSFSSIRRPRPLLEVDPPKSSASGNTDQKMLDKPLEQEPMLAARVTIEDGICLLLDVDDIDRFLQFNQLQDGGAQLRQRRQVLLEGLATSLQLVDLLGKNGQTVELTPKDDLVFLRLVSLPKGRKLLSRYLQHLSPGSELTRIVCMAVFRHLRFLFGGLSSDPGAAATANNLAITVSSSIRGMELRALAACLASVVCSTEHPPLRPVGSPAGDGASVVIKSVLERGTELLTDPHAVSNCSMPNRAFWQASFDAFFGLLTKYCFSKYDTVVQSLLTQGGGPTDMAVVGSDAAKAISWEMPVELLRASLPHTNENQRKLLLDFAQRSMPVLGMNSGGAGNGGT	858

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00133	858	MobiDBLite	consensus disorder prediction	213	263	-	-
	Armi1g00133	858	MobiDBLite	consensus disorder prediction	380	394	-	-
	Armi1g00133	858	Pfam	Topoisomerase II-associated protein PAT1	514	665	IPR019167	-
	Armi1g00133	858	MobiDBLite	consensus disorder prediction	15	31	-	-
	Armi1g00133	858	MobiDBLite	consensus disorder prediction	217	231	-	-
	Armi1g00133	858	PANTHER	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	28	845	IPR039900	GO:0000290(InterPro)\|GO:0000290(PANTHER)\|GO:0000932(PANTHER)\|GO:0003723(PANTHER)\|GO:0033962(PANTHER)
	Armi1g00133	858	MobiDBLite	consensus disorder prediction	526	547	-	-
	Armi1g00133	858	MobiDBLite	consensus disorder prediction	366	431	-	-
	Armi1g00133	858	MobiDBLite	consensus disorder prediction	1	31	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00133	K12617	DNA topoisomerase 2-associated protein PAT1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:2665119	Armi5g01217	Armi-Chr5:27825935	dispersed