AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Busi8g00548 | ATGACATCAAAGCCGGAGCTGCAAAATGAGGCTTTTAACGGTTTCTTTCAGTCACCGAAGCCAGAATTAAAGATTTCCAAGACAGATGTCAAAGTCTCTGATTACTTGAACGAGGACGACAACGAAAGTCGGTTCAATTTCTTTCCAGATTCGATATGTACCGGCCAGAATGACGAAGAATTCTTCGAATTTGATACGAAACCTGAAATCGTTGACCTGACAAGCCCAAAACCTTCCAATTCGAATGATCGGAAACCTTCGTTGAAGATCTCTGTGCCTCCCGTGAAGAAACTCGAGATCTCGGACTTTACAGAACAGCCTCAACCAGCTGCGACAGCGAATAACCAGGTAACATCAGATTCCGTCGAACGGAAACGCTACAGAGGTGTAAGACAGAGGCCATGGGGAAAGTTCGCCGCGGAGATTCGAGACCCTAACCGTCGAGGATCTAGGGTTTGGCTCGGAACATTCGACACCGCCATTGAGGCCGCGAGAGCCTACGATCGTGCGGCGTTCAAGATGCGTGGGAGCAAAGCCATTCTCAATTTCCCTCTTGAAGCCGGAATGGAGTCTGAACCGCCGGTGAATACTCGCCGGAAAAGACGCAGAGAGGGTGAACCAGAAGAGAAAGTTGAAGTGGAATGA | 645 | 48.84 | MTSKPELQNEAFNGFFQSPKPELKISKTDVKVSDYLNEDDNESRFNFFPDSICTGQNDEEFFEFDTKPEIVDLTSPKPSNSNDRKPSLKISVPPVKKLEISDFTEQPQPAATANNQVTSDSVERKRYRGVRQRPWGKFAAEIRDPNRRGSRVWLGTFDTAIEAARAYDRAAFKMRGSKAILNFPLEAGMESEPPVNTRRKRRREGEPEEKVEVE | 214 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Busi8g00548 | 214 | MobiDBLite | consensus disorder prediction | 103 | 126 | - | - | |
| Busi8g00548 | 214 | Pfam | AP2 domain | 126 | 177 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Busi8g00548 | 214 | MobiDBLite | consensus disorder prediction | 67 | 91 | - | - | |
| Busi8g00548 | 214 | MobiDBLite | consensus disorder prediction | 193 | 214 | - | - | |
| Busi8g00548 | 214 | FunFam | Ethylene-responsive transcription factor 2 | 125 | 186 | - | - | |
| Busi8g00548 | 214 | SUPERFAMILY | DNA-binding domain | 126 | 185 | IPR016177 | GO:0003677(InterPro) | |
| Busi8g00548 | 214 | SMART | rav1-2 | 126 | 190 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Busi8g00548 | 214 | Gene3D | AP2-ERF domain | 125 | 186 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Busi8g00548 | 214 | PRINTS | Ethylene responsive element binding protein signature | 150 | 166 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Busi8g00548 | 214 | PRINTS | Ethylene responsive element binding protein signature | 127 | 138 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Busi8g00548 | 214 | ProSiteProfiles | AP2-ERF domain profile. | 126 | 184 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Busi8g00548 | 214 | CDD | AP2 | 125 | 184 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
| Busi8g00548 | 214 | MobiDBLite | consensus disorder prediction | 73 | 87 | - | - | |
| Busi8g00548 | 214 | MobiDBLite | consensus disorder prediction | 186 | 214 | - | - | |
| Busi8g00548 | 214 | PANTHER | DNA-BINDING DOMAIN | 82 | 203 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
| Busi8g00548 | 214 | MobiDBLite | consensus disorder prediction | 105 | 120 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Busi8g00548 | K09286 | EREBP-like factor |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Busi | Busi-Chr6:7379338 | Busi8g00548 | Busi-Chr8:7529719 | dispersed | |
| Busi | Busi-Chr6:7374276 | Busi8g00548 | Busi-Chr8:7529719 | dispersed | |
| Busi | Busi-Chr6:7369321 | Busi8g00548 | Busi-Chr8:7529719 | dispersed | |
| Busi | Busi-Chr8:7529719 | Busi9g01511 | Busi-Chr9:18843787 | dispersed | |
| Busi | Busi-Chr8:7521511 | Busi8g00548 | Busi-Chr8:7529719 | tandem |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Busi10g00247 | . | 1 | 225 | CBF gene family | AT1G50640 | 52.675 | 6.14e-48 | 155.0 | |
| Busi10g00488 | . | 29 | 195 | CBF gene family | AT5G44210 | 50.595 | 2.93e-44 | 143.0 | |
| Busi10g00607 | . | 1 | 330 | CBF gene family | AT2G20880 | 39.551 | 3.84e-55 | 185.0 | |
| Busi11g00703 | . | 83 | 151 | CBF gene family | AT5G61890 | 84.058 | 1.89e-35 | 129.0 | |
| Busi11g01241 | . | 1 | 467 | CBF gene family | AT4G37750 | 52.214 | 1.58e-157 | 463.0 | |
| Busi11g01367 | . | 41 | 276 | CBF gene family | AT5G67180 | 72.51 | 7.99e-102 | 306.0 | |
| Busi12g00843 | . | 59 | 231 | CBF gene family | AT5G52020 | 58.857 | 6.12e-54 | 171.0 | |
| Busi12g00844 | . | 2 | 216 | CBF gene family | AT4G25470 | 54.113 | 4.44e-69 | 210.0 | |
| Busi12g01161 | . | 5 | 331 | CBF gene family | AT4G27950 | 41.399 | 1.89e-68 | 216.0 | |
| Busi13g00162 | . | 27 | 125 | CBF gene family | AT4G31060 | 55.963 | 4.95e-35 | 121.0 | |
| Busi13g00753 | . | 1 | 146 | CBF gene family | AT1G15360 | 69.863 | 1.33e-66 | 200.0 | |
| Busi13g00755 | . | 5 | 199 | CBF gene family | AT1G15360 | 57.071 | 3.67e-65 | 197.0 | |
| Busi13g00896 | . | 1 | 179 | CBF gene family | AT5G25190 | 61.376 | 4.23e-70 | 210.0 | |
| Busi13g00901 | . | 1 | 179 | CBF gene family | AT5G25190 | 61.17 | 4.22e-71 | 212.0 | |
| Busi13g01334 | . | 1 | 412 | CBF gene family | AT1G72570 | 43.954 | 3.78e-109 | 333.0 | |
| Busi13g01410 | . | 1 | 353 | CBF gene family | AT1G53910 | 46.0 | 1.38e-73 | 232.0 | |
| Busi14g00263 | . | 1 | 234 | CBF gene family | AT1G12980 | 37.171 | 1.15e-36 | 135.0 | |
| Busi14g00589 | . | 224 | 367 | CBF gene family | AT5G57390 | 41.837 | 2.06e-38 | 144.0 | |
| Busi14g00681 | . | 19 | 95 | CBF gene family | AT5G19790 | 70.0 | 3.33e-31 | 117.0 | |
| Busi14g00813 | . | 1 | 357 | CBF gene family | AT1G25560 | 62.334 | 6.69e-152 | 430.0 | |
| Busi14g00825 | . | 31 | 161 | CBF gene family | AT1G01250 | 63.359 | 1.42e-43 | 142.0 | |
| Busi1g01024 | . | 1 | 398 | CBF gene family | AT2G28550 | 52.125 | 6.08e-103 | 314.0 | |
| Busi1g01777 | . | 48 | 398 | CBF gene family | AT1G51190 | 41.737 | 3.21e-72 | 232.0 | |
| Busi1g01871 | . | 32 | 407 | CBF gene family | AT2G41710 | 52.86 | 9.27e-123 | 362.0 | |
| Busi1g02573 | . | 99 | 380 | CBF gene family | AT3G54320 | 41.197 | 4.50e-46 | 162.0 | |
| Busi1g02593 | . | 31 | 380 | CBF gene family | AT3G54320 | 48.794 | 2.81e-99 | 301.0 | |
| Busi2g00193 | . | 32 | 77 | CBF gene family | AT2G41710 | 93.478 | 5.74e-24 | 94.0 | |
| Busi2g00540 | . | 40 | 272 | CBF gene family | AT3G20840 | 56.68 | 4.71e-78 | 244.0 | |
| Busi2g00541 | . | 316 | 574 | CBF gene family | AT3G20840 | 47.547 | 2.09e-57 | 191.0 | |
| Busi2g01045 | . | 38 | 318 | CBF gene family | AT2G40220 | 42.657 | 4.88e-42 | 146.0 | |
| Busi2g01437 | . | 1 | 429 | CBF gene family | AT2G28550 | 50.586 | 3.35e-108 | 329.0 | |
| Busi3g00032 | . | 4 | 203 | CBF gene family | AT5G13910 | 44.615 | 1.63e-50 | 163.0 | |
| Busi3g00129 | . | 2 | 162 | CBF gene family | AT5G61890 | 57.669 | 2.34e-46 | 155.0 | |
| Busi3g00204 | . | 42 | 297 | CBF gene family | AT1G51120 | 61.538 | 1.01e-107 | 317.0 | |
| Busi3g00468 | . | 56 | 116 | CBF gene family | AT1G24590 | 86.885 | 2.83e-33 | 115.0 | |
| Busi3g00771 | . | 39 | 241 | CBF gene family | AT3G54320 | 46.305 | 5.59e-47 | 165.0 | |
| Busi3g00784 | . | 256 | 413 | CBF gene family | AT5G17430 | 36.025 | 4.13e-21 | 93.6 | |
| Busi3g00810 | . | 166 | 375 | CBF gene family | AT1G51190 | 40.654 | 1.15e-41 | 153.0 | |
| Busi4g00490 | . | 13 | 302 | CBF gene family | AT4G18450 | 34.824 | 5.94e-39 | 136.0 | |
| Busi4g00496 | . | 48 | 175 | CBF gene family | AT5G47220 | 51.562 | 5.05e-37 | 128.0 | |
| Busi4g00504 | . | 48 | 175 | CBF gene family | AT5G47220 | 51.562 | 4.69e-37 | 128.0 | |
| Busi4g00555 | . | 1 | 100 | CBF gene family | AT5G44210 | 48.0 | 1.41e-19 | 81.6 | |
| Busi4g00560 | . | 7 | 186 | CBF gene family | AT1G28360 | 50.267 | 3.79e-46 | 147.0 | |
| Busi5g01401 | . | 1 | 136 | CBF gene family | AT3G16770 | 52.941 | 3.79e-39 | 142.0 | |
| Busi5g01403 | . | 70 | 135 | CBF gene family | AT3G16770 | 80.303 | 4.50e-32 | 121.0 | |
| Busi6g00007 | . | 10 | 95 | CBF gene family | AT5G19790 | 58.14 | 1.69e-28 | 108.0 | |
| Busi6g00211 | . | 1 | 246 | CBF gene family | AT3G16770 | 40.304 | 1.81e-47 | 156.0 | |
| Busi6g00647 | . | 23 | 83 | CBF gene family | AT1G50640 | 88.525 | 2.02e-33 | 116.0 | |
| Busi6g00733 | . | 19 | 133 | CBF gene family | AT3G23230 | 58.537 | 1.06e-39 | 129.0 | |
| Busi6g00735 | . | 50 | 215 | CBF gene family | AT3G23240 | 54.124 | 4.53e-61 | 188.0 | |
| Busi6g00738 | . | 75 | 214 | CBF gene family | AT3G23240 | 56.028 | 1.01e-45 | 147.0 | |
| Busi6g00924 | . | 24 | 121 | CBF gene family | AT1G75490 | 69.388 | 9.06e-43 | 142.0 | |
| Busi6g01147 | . | 110 | 195 | CBF gene family | AT4G13040 | 79.07 | 1.04e-45 | 151.0 | |
| Busi6g01148 | . | 110 | 201 | CBF gene family | AT4G13040 | 76.087 | 2.30e-47 | 154.0 | |
| Busi6g01494 | . | 1 | 584 | CBF gene family | AT5G17430 | 40.928 | 4.59e-141 | 424.0 | |
| Busi7g00013 | . | 2 | 185 | CBF gene family | AT1G19210 | 48.241 | 3.13e-55 | 172.0 | |
| Busi7g00023 | . | 2 | 185 | CBF gene family | AT1G19210 | 48.744 | 1.58e-55 | 172.0 | |
| Busi7g00361 | . | 37 | 222 | CBF gene family | AT5G11590 | 59.14 | 1.79e-58 | 183.0 | |
| Busi7g00603 | . | 1 | 174 | CBF gene family | AT1G15360 | 58.654 | 5.53e-67 | 202.0 | |
| Busi7g00730 | . | 16 | 343 | CBF gene family | AT1G16060 | 59.375 | 3.04e-119 | 346.0 | |
| Busi7g00906 | . | 1 | 181 | CBF gene family | AT5G25190 | 56.219 | 8.58e-65 | 196.0 | |
| Busi7g01541 | . | 68 | 558 | CBF gene family | AT5G57390 | 53.953 | 4.16e-158 | 460.0 | |
| Busi7g01543 | . | 68 | 558 | CBF gene family | AT5G57390 | 53.953 | 3.74e-158 | 460.0 | |
| Busi7g01721 | . | 180 | 405 | CBF gene family | AT2G28550 | 48.291 | 2.42e-45 | 159.0 | |
| Busi8g00183 | . | 59 | 231 | CBF gene family | AT5G52020 | 59.195 | 2.08e-55 | 175.0 | |
| Busi8g00184 | . | 70 | 135 | CBF gene family | AT5G11590 | 47.826 | 1.33e-11 | 59.3 | |
| Busi8g00188 | . | 21 | 78 | CBF gene family | AT5G19790 | 75.862 | 4.45e-27 | 104.0 | |
| Busi8g00513 | . | 186 | 334 | CBF gene family | AT1G50680 | 43.624 | 2.09e-26 | 99.8 | |
| Busi8g00514 | . | 4 | 351 | CBF gene family | AT1G51120 | 38.636 | 2.24e-71 | 222.0 | |
| Busi8g00515 | . | 205 | 334 | CBF gene family | AT1G50680 | 40.909 | 1.73e-21 | 86.3 | |
| Busi8g00516 | . | 9 | 334 | CBF gene family | AT1G50680 | 45.399 | 7.27e-86 | 260.0 | |
| Busi8g00517 | . | 197 | 334 | CBF gene family | AT1G50680 | 39.13 | 1.73e-20 | 86.3 | |
| Busi8g00519 | . | 9 | 334 | CBF gene family | AT1G50680 | 38.957 | 2.25e-63 | 201.0 | |
| Busi8g00548 | . | 86 | 240 | CBF gene family | AT5G47230 | 55.215 | 2.73e-43 | 145.0 | |
| Busi8g00549 | . | 9 | 256 | CBF gene family | AT4G17500 | 50.545 | 5.02e-73 | 222.0 | |
| Busi8g00587 | . | 87 | 290 | CBF gene family | AT2G44940 | 46.89 | 3.15e-41 | 144.0 | |
| Busi8g00593 | . | 87 | 292 | CBF gene family | AT2G44940 | 51.835 | 7.75e-58 | 187.0 | |
| Busi8g00670 | . | 16 | 343 | CBF gene family | AT1G16060 | 59.659 | 3.25e-119 | 346.0 | |
| Busi8g01472 | . | 63 | 92 | CBF gene family | AT5G18450 | 70.0 | 3.20e-07 | 48.5 | |
| Busi9g00393 | . | 24 | 119 | CBF gene family | AT1G75490 | 80.208 | 8.07e-46 | 149.0 | |
| Busi9g00721 | . | 23 | 197 | CBF gene family | AT4G34410 | 46.032 | 3.27e-36 | 127.0 | |
| Busi9g00722 | . | 23 | 197 | CBF gene family | AT4G34410 | 47.09 | 4.45e-38 | 131.0 | |
| Busi9g00812 | . | 1 | 311 | CBF gene family | AT4G36920 | 59.012 | 4.95e-99 | 303.0 | |
| Busi9g00821 | . | 1 | 140 | CBF gene family | AT5G67190 | 61.379 | 5.60e-47 | 160.0 | |
| Busi9g01014 | . | 182 | 491 | CBF gene family | AT4G37750 | 46.194 | 3.09e-77 | 258.0 | |
| Busi9g01151 | . | 26 | 441 | CBF gene family | AT5G10510 | 52.347 | 2.48e-103 | 318.0 | |
| Busi9g01511 | . | 61 | 142 | CBF gene family | AT2G33710 | 71.951 | 6.18e-35 | 127.0 | |
| Busi9g02246 | . | 50 | 154 | CBF gene family | AT1G21910 | 73.394 | 1.25e-43 | 149.0 | |
| Busi9g02483 | . | 215 | 236 | CBF gene family | AT5G57390 | 86.364 | 8.06e-08 | 50.4 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Busi | AP2 | 1.4e-16 | CL0081 | TF | AP2/ERF-ERF |