Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cati3g00116 | GTCAAAACAGAGTAGAGAGAAAGGTCAGAGATTCACAACCCATTTTCCCCTTCAAATTCTTCATACCTTCCATCTCTGGAAATCCAAAAGCCATCATCATCATCATCAATATTCTGTGTTTTGGATCCATTAATCCATCTCCATCTTCATCTTCATCTTGTTGATTTGATTATTAGTTATGAATACGAGTAATCCAACTACTCCGATGAATGCAAACGCTCCGTCGTCGAGCTCCGGTGGCGCCGGATCCCCCGATTCAGCTCCAAGGAGAAACTCTAAGCGACCTAAATATTCTAGGTTTACTCAGCAGGAACTTCCAGCATGCAAGCCGATTCTTACGCCAAAATGGGTGATTTCAGCATTCATGCTTGTGACAATTGTCTTCATACCAATTGGACTTGCTTCCCTCTTTGCTTCTCGTGATGTAGTTGAAATTATTGACCGGTACGACAATGCCTGTATACAAGGCACAAAAAGTGAAAAGGTCCAATTTATACAGTCCAATGCAAATAAAACATGCACCAGAAGTTTGACGGTTAAAAAGCGGATGAAGCAGCCAATTTATGTCTATTATCAGCTGGACAATTTCTACCAGAATCATCGCAGGTATGTCAAGAGCCGAAGTGATTCACAATTGAGAAACCGTGGTGATGAGAATCAAACAAGTGACTGTAAGCCTGAACATGATGCCAATGGGATGGCGATTGTGCCTTGTGGTCTTGTCGCCTGGAGTCTGTTCAATGACACCTATAGCTTCTCCACTGGTAGCAACCAGCAATTGGCTGTAAACAAGAGACACATTTCATGGAAGAGTGACAGGGAGGACAAGTTTGGCAGCGATGTCTTCCCTAAAAATTTCCAGAATGGATCTCTTATTGGTGGTGGACGTCTCAATGAGTCTTTGCCATTAAGTGAGCAGGAAGACCTCATTGTGTGGATGCGAACTGCGGCCCTTCCAACTTTTAGGAAGTTGTATGGGAAGATAGAGGTGGATATCGAGGCAGGTGAGACGATAAACGTGAGATTGGAGAACAACTACAACACTTACAGCTTCAGCGGCAAGAAGAAACTTGTGCTTTCGACTACCAGCTGGCTTGGCGGAAAGAATAACTTTATTGGCATTGCATACCTTGCTGTTGGCGGCTTGTGCCTCTTACTAGCTACGACTTTCACCCTCATATATCTAGTTAAGCCAAGGCATCTTGGTGATCCGACTTATTTGTCATGGAACCGAAACCCAGGTGGTCATTGATGCGCGATTGTGCAATTATGAGGTGGGTCGAAGGGGCTCCTTGTGATCTTGTATGTATTTAATCTCTTCTAAGGCCATACTCTGTAGATCAGGTAGAACCGTTCCATTGGTTGTTTCGCAATTTTATTTGTTGATAAAGACTTTAAAGTAGACATCTGTATTATTGAGCACAGGGTGAAAGTTACGTTCACCCCTCTCGAATGTGCTATACCCTTCATGAAACATGTATTGATATTTTCAAGTATAGAATGAACGTTGCTGTTTTCCGTTTCTTGAATGTTTTGTTATGTCATGGAGTTTTACGTTGCAATTTCTAATATTTTTAGAGTTAATAGATTATTAGCTTGCAGAATGTGTAGAAAGAACATAACATTTACACTTTTCATAACTTCCATTGCATTTATTTCAAAGACATAGTAACAGAGTATATGTGTACTCAAAACCCCAAATCATATTTTTGAGATATGAATATATATTCTATCTCTATTTGCACTTTGTTACTTACAAAAAGCTGTCTCTAATCATGTAAAAGGAAACTCCCAATTAGAAGTAGAGGAAATGGCACCCATCATAACCTGGGTCAACGGTGACGAGCATGGCGGCACCGCCAAATTCACAGGTACCTCCGCCCACTTTTGTTCTTTGCCAGTAACTGTTGAATGCATAGGAAGCATGTGCAAACAATGTGTCTGGCTGATAGCAGTCTCTGTTTGGCTGCAGCGCTTCGCAGTCGGCCCCGGACCCACAAGCGTAGTTCATGGCTTCTTGGATGATCGGGTCTGGGACCGAAGGTTTCGCCACGCACCACAGTGCAGACTCCGGCTCGCTATGGGCAGGCGGGGGTCCTGTCGGAGGAGGGTACACGACTGGCGGTTCAAAGAGAGGCGGGGCGGGTATGAACCCTGTAGGAGACGGAAATGAGAATGTTGGTGGGCTTGGTTCAAAACTATAAGGCGGTCCCCCAACTGGGGTGGGTTCATAGGTGGCAGGCGAGCCTGGGGTGGTGGTAGTGGGCGGCGTGGAAGGAGTGGAGTAAGAGAAAGGCGGTGTAGGATAGGAAGAAGAGGATGATGCTGGCGGTGATGGGGTGTAAGATCCAGTGGAAGGTGGAGAAAACCCAGGCGATGTCGATGTCGGTGGCGGCAGGCTGGTGGTGGAAGGCGGTGAAAACCCGGATGATGTTGGTGGCGGTAGACTGGTGGTGGAAGGCGGAGAAAACCCAGATGACGTTGGTGGCGGCAGACTGGTGGTGGAAGGCGGAGAAAACCCAGATGATGACGGTGGCGGTAGGCTGGTGGTGGAAGGCGGAGAAGACCCAGGAGGATAGGAGCAATAAGCCTCAGGTAAAACAGGAGTAAGAGGATCAACAGGCGGCAACGGGAAATCATCCGCTAGATGATTAACAACATGATATCTCGACGATAATGTCAACGCTCCTGGTAATCTTGCATCTGATGATGCGGTGGAAGAAACGACAAATGCATAGAGAAACAACGACACCCAGTTCATCTTCATGGTCATTGATGTCATCTGCATATAGATACGGATATCATATATATATAGGTCGGAGAGTGATGGTGAGACGGAGTTCTTGCATGTGAGCACCGGTTTTCCGATACTTAGGAGATGGTTATGGAGATGGGTATGTAAGAGATTCTTGGCTTAAGAATGGATAAAAGCACCCTTAGAATGAGAAATGAAATGGAAAGGCTTTAATTTTGCTTGCTTTCTACTCAAAGCTATGAAACAGTATCCCAGTAGTAACACTAGTATATATCTGGCTAAAAGTCTACTACACCACCTCAAATAGTTTTGGAATCTATTTGGTTTGAAAGGTTTTTTTTTTTGT | 3101 | 44.82 | MNTSNPTTPMNANAPSSSSGGAGSPDSAPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLASLFASRDVVEIIDRYDNACIQGTKSEKVQFIQSNANKTCTRSLTVKKRMKQPIYVYYQLDNFYQNHRRYVKSRSDSQLRNRGDENQTSDCKPEHDANGMAIVPCGLVAWSLFNDTYSFSTGSNQQLAVNKRHISWKSDREDKFGSDVFPKNFQNGSLIGGGRLNESLPLSEQEDLIVWMRTAALPTFRKLYGKIEVDIEAGETINVRLENNYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCLLLATTFTLIYLVKPRHLGDPTYLSWNRNPGGH | 357 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cati3g00116 | 357 | PIRSF | Lem3-Cdc50 | 8 | 353 | IPR005045 | GO:0016020(InterPro) | |
| Cati3g00116 | 357 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 29 | 349 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Cati3g00116 | 357 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - | |
| Cati3g00116 | 357 | MobiDBLite | consensus disorder prediction | 147 | 166 | - | - | |
| Cati3g00116 | 357 | MobiDBLite | consensus disorder prediction | 147 | 169 | - | - | |
| Cati3g00116 | 357 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Cati3g00116 | 357 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 77 | 340 | IPR005045 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cati3g00116 | K26935 | cell cycle control protein 50 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cati | Cati-Chr3:566385 | Cati3g00116 | Cati-Chr3:566385 | dispersed | |
| Cati | Cati-Chr3:566385 | Cati7g03564 | Cati-Chr7:72739600 | dispersed | |
| Cati | Cati-Chr3:566385 | Cati3g00116 | Cati-Chr3:566385 | tandem |