AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cati3g00329 ACAAAATCCCCTCAATTCTTCCCTCTGCCTTCAATTTGCTGCCTTCAAGATTCTTTCAAAAAAATCACCAACCGGTGACGTCGTAACTTTCCGTCAACTCTCTCCGGCCACGATCCGGTCACCGGAGAGTATACAACAACAGAATGGCACGTGGCCTCTTCTCTTGCTTCCAATCATCCCCCACCATCTCTAATTCGGACACCAACAACAAACCACCCACTTCACACGACGCCGATCTGACGGCGGAGGAGCTCCGGCGAGGAGGGCCGGTGGTGGTGGAGCTGTTCTCGTCGCAAGGGTGCGCCACCTCGCCGGCGGCGGAGCTGCTGTTCTCGAGGGTGGGAAGGGGGGACTTCGATCTGGGGGTGCCGGTGATCTTGATGGCTTACCATGTCGATTATTGGGACTACAACGGGTGGAAGGATCCGTTTGGGTCGAGCCAGTGGACGGTGAGGCAGAAGGAGTATGTGGAGTCGTTGAATCTTGACACCATGTTTACACCCCTGGTGGTGGTTCAGGGGAGGTTTCAGTGTATCGGGAACGATGAAGATGGGTTGATTTCTTCGATTGTGGGTGCGGCTAGATACCCTCCGCCGGCGTTTCAGGCAACATTCGAGAGGCCAACGCCCGAATCTTTACAAATCTCCCTAAAAGGCGCTTTAAGGGCGAAGCTAGAAGGCCAGGGAGCCGACATCATGGTGGCGCTCTACGAGAGCGGGCTCGTGACCGATTGCCAAAGCGGTGAGAACAAAGGCCGAATGCTAGCCAACGATTTCGTGGTCCGAAAGCTCGCGAAGCTCTGCACGGTCAATAACGTCCCTCCCAAGAAGACGCTTAGCGGGACCCTGGATTTTAGCCTCTGGCAAGGCTTCAACGGGGCCAAATGCGGCGTGGTCGTGTTCGTGCAGCAACATGGATCCCATCACATATTTGGTTCCCAGCGCATTCCGCTACCTGCAAATATCTGAGTCGGTGTTTTTTCGTAGCGGGTTAATTTGTTTGACCGTCGGTTATGGCTTTTGCGTGTCTGAATGATTGAAGTAGCGCGATATCGCGGCATTGGTTGTATAGTATGCTGTAGGTGATTGGTTTCTTTGTTAGTTTGATCATAAGTTTGTGGAATTTGGGTACTTAAATCTGATAGATTACATCTTGAAATACAGTTTTTTGGAACTTGGCTCAAACCTTCATTTGGGTTTCTGTTTTCTAACACACATTTGACATTTGTATGTAATAAACATAAGCAAAAGGCAAAATAAACATGGACACTTGTGTCTGAAATCATTTAGATTTAGGAGTTGTTTGTTAGCGGCTTAATGGGACTGACAACTTATTTGATTAACAATATATGACCGGTTGCTGGTGGCTTTATGATATAGAAAATAGCATATTCAGTAAGTATATTGGTGGAGTTTTGTGAAGAAAACCAAGTTTTTTTTTTCAAACATGCGTCTCCCAATCTATGAAAAGTTCCTCCCAAACAAAGACTTTATCAATTTATACGGATAGATTAATCCATACAGATAGTTTTAGCCATACAGGACTTGACTTGGTGATAAACCAACCAAACAGCCTCTTACCTCTTAACCATTCGTTTTTAATATATCTTGGAATCTTCCTTCTTTCTTTATGAGCTCTTTTGGAGAGTAATATGATGCTGTTCCAATCCTTGGCTCTGAGAGATTATCTAGCTTATTGATATGGACCCCAACAACTCAAATAGGCTACCGTCCTCAATGATTCTTCGGCATCTCTAGGGTTCTTTGCTTTGCATGATGGGTCCAATGCAACCGGATACAGGCTTGCTTGCGACACCGATGGACCAAGTGCTTGCCAAAGCGTGTGTGGTCTGGATCTAGACGAGAGATGTCGCAAGCCTATTACGGCTCCGAGTGTCAGAATGAAACAAGCCTTGTTGACGAGCTTCATTTTTGTGGACTTTGGAAGTCAAACGAGCGATATATTGAGTTCCTTTGATTTGGCAAGCGATGAATATGTATCTTCTTGAGGTTTGGGATGTGGGTATTGTTGGGAAACCTTTTGGGTATGGTTTTTTGAGATTGGGAATGTGGAGGTGAAGGTGGGCTTATATAGAGCTAGAAAAAGTTTTGAGTTTCAGAGAAAAG 2126 46.38 MARGLFSCFQSSPTISNSDTNNKPPTSHDADLTAEELRRGGPVVVELFSSQGCATSPAAELLFSRVGRGDFDLGVPVILMAYHVDYWDYNGWKDPFGSSQWTVRQKEYVESLNLDTMFTPLVVVQGRFQCIGNDEDGLISSIVGAARYPPPAFQATFERPTPESLQISLKGALRAKLEGQGADIMVALYESGLVTDCQSGENKGRMLANDFVVRKLAKLCTVNNVPPKKTLSGTLDFSLWQGFNGAKCGVVVFVQQHGSHHIFGSQRIPLPANI 274
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cati3g00329 274 Pfam Protein of unknown function (DUF1223) 44 255 IPR010634 -
Cati3g00329 274 PANTHER - 1 274 IPR010634 -
Cati3g00329 274 SUPERFAMILY Thioredoxin-like 40 270 IPR036249 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cati3g00329 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cati Cati-Chr3:2687225 Cati9g01947 Cati-Chr9:20778067 dispersed