AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ccar2g02150 ATGTTGAGGATCAAGAGGGTTCCTACTATTCTTTCCAATTACCAGAAAGAGGAGGCTGAGGATGGCGGTGCAACCCGTGGTTGCGGCCGTAATTGCCTGAGAAACTGTTGCATAACAGGGGCTAAGCTACCTTTGTATGCTTTTCCAAAATCCAACAAGAAGGTTGATTCATGCGACAAAATCGAGTTCCCTTTTTCCTTCTTGGACTCCCTTCTTCTAGGAGAGGTGATTCCAGGTGAACATGGCTTTGTTGCTCAGCTGAACGAGGGTCGCCACCTGAAGAAGCGTCCCACTGAGTTCCAAGTTGATAAGGTGCTGCAGCCCTTTGATGAGAACAAGTTCAACTTTACCAAAGTTGGACAGGAGGAGGTGCTCTTTCAGTTTGAAGCAAGTGAAGATAATGAAGTCAGTTTCCATCCAAATGCTTCTGTTGATCTTGGCAAATCCCCAAGTGTTGTTGCCATTAATGTTAGTCCGATTGAATACGGGCACGTACTTCTGATTCCTCGAATACTTGAACGTTTACCTCAAAGGATTGACCATGAAAGCTTATTGCTTGCACTGTATATGGCACGTGAGGCTGCAAGTCCACACTTTCGTCTAGGTTACAATAGCTTGGGTGCATTTGCTACTATCAATCATCTTCACTTCCAGGCTTACTACTTGGCTGTGCCATTTCCAATTGAGAAAGCTCCCACTAGAAAGATCAGTGAGTTCAATGGTGGGGTTCTGATTTCTGAGATTTTCAACTATCCTGTTAAAGGTCTTGTGTTTGAGGGTGGAAATTCTCTTGAAGATTTATCCAATGTTGTCGCTGACTCCTGCATATGCCTTCAAAACAACAATATACCTTACAATTGTTATGCGGAAAAGCAGGCTCTTGGAGAAGTGAGTCCCGAGGTTCTAGATACACAGGTGAATCCAGCCGTGTGGGAAATCAGTGGGCATATGGTGTTGAAAAGGAAGGAGGATTACGAATGGGCATCGGAGGAAAAAGCTTGGAGGCTTCTTGCAGAGGTTTCTTTGTCTGAAGAAAGGTTTCATGAAGTGATAACAATTATATTCGACGCCATTTCCTGTGGCGTTAACGAGAAGAAGTTGGTGGCTGACGACCATCAAGATATCGACCAAGTTGGTGGTGTGAACAACGGACCCAATGCAGATGCAGCCGTGGTTCCTGGTAAGCAAGAATGCCTAGTTCAATACTAG 1209 44.83 MLRIKRVPTILSNYQKEEAEDGGATRGCGRNCLRNCCITGAKLPLYAFPKSNKKVDSCDKIEFPFSFLDSLLLGEVIPGEHGFVAQLNEGRHLKKRPTEFQVDKVLQPFDENKFNFTKVGQEEVLFQFEASEDNEVSFHPNASVDLGKSPSVVAINVSPIEYGHVLLIPRILERLPQRIDHESLLLALYMAREAASPHFRLGYNSLGAFATINHLHFQAYYLAVPFPIEKAPTRKISEFNGGVLISEIFNYPVKGLVFEGGNSLEDLSNVVADSCICLQNNNIPYNCYAEKQALGEVSPEVLDTQVNPAVWEISGHMVLKRKEDYEWASEEKAWRLLAEVSLSEERFHEVITIIFDAISCGVNEKKLVADDHQDIDQVGGVNNGPNADAAVVPGKQECLVQY 402
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ccar2g02150 402 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 76 360 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(InterPro)|GO:0080048(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ccar2g02150 K14190 GDP-L-galactose phosphorylase [EC:2.7.7.69]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
38894 Ccar2g02150 Ccar6g00577
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ccar Ccar-Chr2:68696003 Ccar6g00577 Ccar-Chr6:16538149 wgd