Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g02262	ATGGCGTTTTTGTTCAAGAAGATTTTGGAGTCTGCAAATCCATTGAATTCCAGTAGTTCCACCTCTTCGTCGACCTCCAATTACTCGGTTTCAAGTCATGTATCCTTATCAGATCAGATTATCGTCTGTTCGTCGTCCACTGGAGAGTTCGATCGAATCCCCTTGGATATATTTATGCAAATCCTCAAATTACTTGGACCTAAAGAGGCTGCTAAGCTCACTGTAATCTGTAAATCATGGAAATTAATTGTTTCTGATAATATGTTTTGGATATCTTACCTTCAGAACCAGCAAGGTCCATGGGACTCGATGTTCTTCGCTGAAACCAATTTGCGGTCTGGTTATCCTCTTCGAACATATCCTTCTCGGATGCAATCATTTATGCATATTTATGGTCAACGAGCACAGGTTCCTGGAGCCATTATCATTGACGGTGGTTCTGGCTATTGCAAATTTGGTTGGAGCAAATACGATTCTCCATCTGGGTGGGCAGCAACATTTTTGGAATTTGGTAACATCGAGTCTCCCATGTACTCTAGGCTTCGCCATTTCTTTGCAACAATGATGCATGTGAAGTCATCTACACAGCCAACTGTTGTCTCGATTCCAATCACCCATTCTGACAATACACAAGCTGCTAAAACAGCTAGACGACAACTAAAAGAAGCCATCTACTCGGCATTGTTTGACATGAATGTTCCTTCTGTCTGTGCAGTCAGCCAGGCAACTTTAGCTTTGTTTGCAGCACGGAGAACTTCAGGAATTGTTGTCAATATTGGTTTTAACCAAACATCTGTTGTACCAATTTTACATGGTAAGATAATGCACAATGTGGGCGTGGAAGCTGTGGGAGTTGGAGCGTTAAAGCTTACTGGTTACCTTAGGGAGCAAATGCAACAGAGAAATCTACCTGAATTACGCAAGGATACAGAAGGGTCGTATGAAGTTCCTGTTGAGGTGGCACTTTGCGTTGACCATTGCCATGCTGCAGGATTAACCCCTGATGAGACTTGGTTCAAGACCATTGTTTTAGCTGGGGGCACTGCTTGTTTACCAGGGCTAGTAGAAAGATTAGAGAAAGAACTTCACCTTATTCTTCCCTCGTCCCAATCCAATGGAATACTTGAGCACCTTTCCAAATTCTTGGTGCATCACAAAGAAGGAATTCAGACCAAAGTCCAGAAGAAACTTCATGTGGTGATATTTGGGGATTAA	1215	42.47	MAFLFKKILESANPLNSSSSTSSSTSNYSVSSHVSLSDQIIVCSSSTGEFDRIPLDIFMQILKLLGPKEAAKLTVICKSWKLIVSDNMFWISYLQNQQGPWDSMFFAETNLRSGYPLRTYPSRMQSFMHIYGQRAQVPGAIIIDGGSGYCKFGWSKYDSPSGWAATFLEFGNIESPMYSRLRHFFATMMHVKSSTQPTVVSIPITHSDNTQAAKTARRQLKEAIYSALFDMNVPSVCAVSQATLALFAARRTSGIVVNIGFNQTSVVPILHGKIMHNVGVEAVGVGALKLTGYLREQMQQRNLPELRKDTEGSYEVPVEVALCVDHCHAAGLTPDETWFKTIVLAGGTACLPGLVERLEKELHLILPSSQSNGILEHLSKFLVHHKEGIQTKVQKKLHVVIFGD	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g02262	404	SMART	fbox-2	53	93	IPR001810	GO:0005515(InterPro)
	Ccar2g02262	404	SMART	actin-3	138	398	IPR004000	-
	Ccar2g02262	404	Gene3D	-	247	379	-	-
	Ccar2g02262	404	SUPERFAMILY	Actin-like ATPase domain	251	371	IPR043129	-
	Ccar2g02262	404	SUPERFAMILY	F-box domain	46	109	IPR036047	GO:0005515(InterPro)
	Ccar2g02262	404	Gene3D	-	37	115	-	-
	Ccar2g02262	404	ProSiteProfiles	F-box domain profile.	47	93	IPR001810	GO:0005515(InterPro)
	Ccar2g02262	404	PANTHER	ACTIN	148	299	IPR004000	-
	Ccar2g02262	404	SUPERFAMILY	Actin-like ATPase domain	139	257	IPR043129	-
	Ccar2g02262	404	Gene3D	-	136	246	-	-
	Ccar2g02262	404	CDD	NBD-sugar-kinase-HSP70-actin	141	281	-	-
	Ccar2g02262	404	Pfam	Actin	216	303	IPR004000	-
	Ccar2g02262	404	Pfam	F-box domain	50	91	IPR001810	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g02262	K16616	actin-related protein 8, plant

Event-related genes

Select	Gene_1	Gene_2	Event_name
	37911	Ccar17g00033	Ccar2g02262

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ccar	Ccar-Chr17:223091	Ccar2g02262	Ccar-Chr2:69636893	dispersed
	Ccar	Ccar-Chr1:7909078	Ccar2g02262	Ccar-Chr2:69636893	dispersed
	Ccar	Ccar-Chr17:214699	Ccar2g02262	Ccar-Chr2:69636893	wgd