Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ccar2g02315	ATGAGTAGCTGGAGGAGTTTGATTTTGCGAATCGGAGAGAAGTCCTCTGAATATGGCGGTATAATCGATTACAAAGACCACATTGATGCTTGCTTTGGTGTGGTTCGGCGGGAACTAGAGCATTCTGAAGACGAAATCTTAACTTTTCTTCTCCAATGTTCAGAGCAATTGCCTCACAAGATTCCTCTATATGGGACGGTGATTGGGTTATTGAACTTGGAAAATGAAGAGCTCGTCAAGAAAATATTGGAGAGTACTCAAAAGAGTTTGCAGGATGCACTTGACACTGGAGATTGTAATAAGATCCGTGTATTAATGCGGTTTCTAACTGTTTTGATGTGTAGCAAAGTCGTCCAACCAAGTTCACTAGTGGTGGTTTTTGAAACGTTATTATCTTCTGCTGCAACTATAGTGGATGATGAGAAAGGGAACCCTTCATGGCAAGCCCGTGCTGATTTCTACATAACTTGCATTCTTTCCTGCCTTCCTTGGGGTGGGTCTGAACTTGGCGAGCAAATTCCAGAAGAGATTGAAAGAGTTATGGTTGGGATAGAAGCCTATTTAAGTATCAGAAGACGTGTTTCTGACGTTGGTCTATCTGTCTTCGAGGAGATAAACAAAATTGATAAAGTTCATGTTGAACAGGATTTTGTGGAAGACCTATGGAGTCGAATCCAAGATCTCTCCAAGAACAGCTGGAAACTTGAGAGTGTTCCAAGGCCACATCTTTTATATGAAGCACAGCTAGTAGCTGGGAAGTCTCATGATATTGGACCCATCAGTTGTCCTGAGCAACCAGATACCCCTGGGGAACTCTCTGGAGTCAGTTTTGGTAGACAAAAGCACGAGGCAGAATTGAAATATCCTCAGAGGATACGAAGGCTCAATATATTTTCTGCTAGCAAAACTGAGGATCTACAGCCTATAGATCGTTTTGTTGTGGAAGATCGAAAGGAATGTGCCGCATGCATGGTTGGCCTACCAGTTCCTTTCAGATATGAATATCTCATGGCCGAGACAATTTTCTCTCAGCTTCTTTTATTGCCTCAGCCACCATTCAAGCCCATATATTACACACTTGTCATTATAGACCTTTGTAAGTCTCTTCCAGGTGCTTTCCCTGCAGTTGTAGCTGGGGCTGTCCGTGCCCTTTTTGATAGAATAAGTGAATTAGATATGGAGTGTCGGACACGCCTCATTCTTTGGTTTTCACACCATTTATCAAACTTTCAGTTCATCTGGCCCTGGGAAGAATGGGCTTATGTCTTAGAGCTTCCAAAATGGGCTCCACAACGTGTATTTGTCCAGGAGGTTTTGGATAGAGAAGTCCGTTTATCGTATTGGGATAAAGTGAAACAGAGCATTGAAAATACCCCAGCTTTAGAGGAATTGCTTCCTCCAAAAGGTGTTCCTGACTTCAGATATGGTTCAGAAGATGATGATAAAACTGAGTATACACTTTCAACAGAACTTAATGGTATGGTGAAAGGAAGAAAAACGGCACGTGATGTTATCACGTGGCTTGAAGAAAGTGTAATCTCAGTCAATGGGCTGGATATTGCCCTCAGAGTAGTTGTTCAGACCCTTCTGGACATTGGATCAAAGAGTTTTACTCATTTGATTACTGTGTTGGAGAGGTATGGACAGGTTATTGCAAAAATTTGTTCAGATGAAGAAACTCAAATTACATTAATAGCGGAAGTTGGCTCATTTTGGAAGAATAGTGCTCAGTCAACAGCCATAACAATCGACAGAATGATGGGTTATCGGCTTATATCTAATTTGGCTATTGTTAAATGGGTCTTTTCATCATCAAATGTCGAGCTATTTCACACCACAGATCGTTTATGGGAGACAAAGGAGGAGGAGGTGTCTACTCGTGAATCTTTGGAGTCAAAGGAGGCTCTTTTTGCACGAGCCCTTGAAGAGAATGAGGCCTTGTTTCTATCTTTATACAAAAATTTCTCCAATGTTTTAATGGAACGCCTCCATGAAACGTTTGGAGAGAAAACCTTGGAGCCTACTGGTGATTCAGAAGCAATGGTCGTCGATGAAGAAGACACACCTGCAATGGAGACGGATAAAGAAAATGGAAGCTCCAAGAGGTACCATTTCCGCTTTAACTTTTTCCTGGCTGTCAAAATTTGTGTGTTTTCCACCTGTAATTTTAGTGCACTCTCTTATTTGTGTAGAAATGCCGGTAGTGGCACCGAATATATCGTAGAGGAGAAAGAACAATGGTGTTTGTCAACTTTGGGTTACGTGAAGGCTTTTTCAAGGCAATATGCTTCAGAGATATGGCCACACATGGATAAGTTAGAGGAGGAAGTACTAACGGGAAGTGTTCATCCGCTATTCAGAAACGCCGTTTATTCCGGTTTGCGTTTACACATCGATCAATGA	2403	41.82	MSSWRSLILRIGEKSSEYGGIIDYKDHIDACFGVVRRELEHSEDEILTFLLQCSEQLPHKIPLYGTVIGLLNLENEELVKKILESTQKSLQDALDTGDCNKIRVLMRFLTVLMCSKVVQPSSLVVVFETLLSSAATIVDDEKGNPSWQARADFYITCILSCLPWGGSELGEQIPEEIERVMVGIEAYLSIRRRVSDVGLSVFEEINKIDKVHVEQDFVEDLWSRIQDLSKNSWKLESVPRPHLLYEAQLVAGKSHDIGPISCPEQPDTPGELSGVSFGRQKHEAELKYPQRIRRLNIFSASKTEDLQPIDRFVVEDRKECAACMVGLPVPFRYEYLMAETIFSQLLLLPQPPFKPIYYTLVIIDLCKSLPGAFPAVVAGAVRALFDRISELDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLELPKWAPQRVFVQEVLDREVRLSYWDKVKQSIENTPALEELLPPKGVPDFRYGSEDDDKTEYTLSTELNGMVKGRKTARDVITWLEESVISVNGLDIALRVVVQTLLDIGSKSFTHLITVLERYGQVIAKICSDEETQITLIAEVGSFWKNSAQSTAITIDRMMGYRLISNLAIVKWVFSSSNVELFHTTDRLWETKEEEVSTRESLESKEALFARALEENEALFLSLYKNFSNVLMERLHETFGEKTLEPTGDSEAMVVDEEDTPAMETDKENGSSKRYHFRFNFFLAVKICVFSTCNFSALSYLCRNAGSGTEYIVEEKEQWCLSTLGYVKAFSRQYASEIWPHMDKLEEEVLTGSVHPLFRNAVYSGLRLHIDQ	800

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ccar2g02315	800	Gene3D	-	477	791	-	-
	Ccar2g02315	800	SUPERFAMILY	ARM repeat	2	296	IPR016024	-
	Ccar2g02315	800	Gene3D	-	295	469	-	-
	Ccar2g02315	800	Pfam	MIF4G like	485	669	IPR015174	GO:0016070(InterPro)
	Ccar2g02315	800	SUPERFAMILY	ARM repeat	294	466	IPR016024	-
	Ccar2g02315	800	Gene3D	-	3	269	-	-
	Ccar2g02315	800	FunFam	Nuclear cap-binding protein subunit 1	3	269	-	-
	Ccar2g02315	800	FunFam	Nuclear cap-binding protein	296	469	-	-
	Ccar2g02315	800	Pfam	MIF4G domain	24	223	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Ccar2g02315	800	SMART	if4-15	5	229	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Ccar2g02315	800	PANTHER	CAP BINDING PROTEIN	4	619	IPR027159	GO:0000184(PANTHER)\|GO:0000339(PANTHER)\|GO:0000339(InterPro)\|GO:0003729(PANTHER)\|GO:0005634(PANTHER)\|GO:0005845(PANTHER)\|GO:0005846(InterPro)\|GO:0005846(PANTHER)\|GO:0006406(InterPro)
	Ccar2g02315	800	SUPERFAMILY	ARM repeat	466	788	IPR016024	-
	Ccar2g02315	800	Pfam	MIF4G like	331	455	IPR015172	GO:0016070(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ccar2g02315	K12882	nuclear cap-binding protein subunit 1