AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso4g04245 ATGGTTCGACGTTTCTTGGTTTGGACCAATGGGAAATTAGGACTCCTTTTGGGAAGCAGTTGCGGACTTGCAGCCATGGTTGAAGACCTGAAGATTACTGGGAAGACTGAATCCATCATTTCCTTTACTTTTTCAAACTACATCTTACTTCCCCAATTTGCTACTTCAGAATCTGGGTTGGTGTTACACAGAGAGACCATCATGGACTTCTGGGTGGTTGCAGCCGCTACCGGTGCCGGTTACGTGGCCAAGCACTTGCAGAGCTTATCGGGTGACAAAGATGGCTCGTCGAACCAGTCACCTATGCCATCACCACGGCTACAACCACAACCATGCCGAGCTTTCAGCAAAATCCCCAACTCGGTTTTCCCACCACCAGCTTCTGGTCTAGCTCCGGCCTATATAGAGAAACAAATTCTGCAAGACGATCCCGATGAAATCAACGAAAAACACGACTACTTTGACACTTCAGGCCATCATTTACAAGAATTCAGAACCAATAACACGAATGCCAAATCGTTCTCAACTCTGAGACCCTTAGTGGCAACCAGTAACGGTAGAGATTCTGGGCGGAAGAAAATGACAAAACTTGATGATACAAAAGACCGTAAGATCGTGTTCATGAACGAAATTGGAGCATCTGTGGAAGCAGCGCTCCTTGAAGCAGATGGATCAGTGAAGCTTCCAAGAAGACCAAAACAAATGCATGTCAAGAGATTTGCGACGGGAAACGATATGGTGCCATTGTTCATCGGGATCACGATCGGGATATTGTCGACTATTGTAAATAATCAGCACGAAGTCGACCATCTAAACGAGCTGCTAGAAGAAGCTGAAAGTATGGCTCGAGATTTACACAACAAACTTGAAACAAAAGACAGGATTACAAGAAAGGAGCATGGCACCGAGGCAATTGAAACTGCAACCAATAGTCCAAAAGCCGACAACTTTGAGTTAACAAGTGACATCGAGGCAGAGCTAGAGGCCGAGCTTGTGAGATTGGAACAAAATATGACTAACGTTATGGAGGTTGATTCAGACATTGAAGCAGACATGGCTGAAGGAGACTTGAACCTAGATTCCCTCACCTGGCAACTCGATAGCCGATCTGAATCGGACCACGGTGACAACAACGAAAGCACCAGCAGACCCGTTTTCACTCCAAACTACGCGGTTTCGCCACTGGACTTACGGCTACGCCTTCACGAACTAATCGAGTCGGAACTCCGAGCCCGCATCGAGGAGCTCGAGGCCGTTCTCGAGAACCAAAACAGCCAAAGCAAGCCTCGTTCTCCACAATCACAAGAAGAAAACTCTTTCTGGGACTTCGATCACACCAGAATCGAATCTTCTTCATCGACCCCTTAA 1368 46.86 MVRRFLVWTNGKLGLLLGSSCGLAAMVEDLKITGKTESIISFTFSNYILLPQFATSESGLVLHRETIMDFWVVAAATGAGYVAKHLQSLSGDKDGSSNQSPMPSPRLQPQPCRAFSKIPNSVFPPPASGLAPAYIEKQILQDDPDEINEKHDYFDTSGHHLQEFRTNNTNAKSFSTLRPLVATSNGRDSGRKKMTKLDDTKDRKIVFMNEIGASVEAALLEADGSVKLPRRPKQMHVKRFATGNDMVPLFIGITIGILSTIVNNQHEVDHLNELLEEAESMARDLHNKLETKDRITRKEHGTEAIETATNSPKADNFELTSDIEAELEAELVRLEQNMTNVMEVDSDIEADMAEGDLNLDSLTWQLDSRSESDHGDNNESTSRPVFTPNYAVSPLDLRLRLHELIESELRARIEELEAVLENQNSQSKPRSPQSQEENSFWDFDHTRIESSSSTP 455
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso4g04245 455 Coils Coil 406 426 - -
Ceso4g04245 455 Coils Coil 317 344 - -
Ceso4g04245 455 Coils Coil 261 295 - -
Ceso4g04245 455 MobiDBLite consensus disorder prediction 90 111 - -
Ceso4g04245 455 MobiDBLite consensus disorder prediction 420 455 - -
Ceso4g04245 455 MobiDBLite consensus disorder prediction 368 389 - -
Ceso4g04245 455 PANTHER EMB|CAB62613.1 68 426 IPR040348 GO:0008356(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso4g04245 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr1:85889699 Ceso4g04245 Ceso-Chr4:95628959 dispersed