AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cien5g03674 ATGGAGCTGGTGCCTTATTCTGATCCTAACACCAATTTCAACTCCTCCGCTTCACCGCCGTGGCAAGACATGTTCCGATCAGCCTCAACCCGCCAACCAGATCCATCTCCCGAACCCCAACTCAACCCTCAGTCACCGACGGACTCACCGGAATCCACCACCAATTCAGATCGGGATGACTCCTCTCCTATCTCCGGCGACCCTCAGGTTCGTCTCGCACTATATATAGCCATGGCACACGCTGGCTTAGCTTTTGCTATCGTTGTTATCTACGGCGTTTCTAAATTACTTGAAGAATATCTCCGCCCGATTCTCTGGGCTGTTCTTTGTTCAATTCCCCTTCGAGGAATTCAGCAAACTCTAGTTTCGTTTTGGTCTGAACCGTTAAAATTGGGTCTTACAGAAACTGTACTCGCTATACCTGTATACGTCTATACAGTTTTCATCGGAAATCTCGTTGAGATTAAAGATTTTTTATCCAAATTAATCCTTCGTAAGAAGAAAAAAGAAGTCGCGAAACGAAAGCGAAGCGGTTTTTCAATTTTGTTGAGATGGTTGGTGTCGTTTTGGGTTTTCGTAATGGCTTACGAACAACTTGGCGTTTTTGGTGCTATCGCTTTGTTAGCATTAGGATTTATGTTTACATCTAGACACGTTAAGTCCACCATGTCTGCCGTTTCTTCATTTGGAGGTCGTACTTTGAACCAAAATCGTCATGCAGCTTTCCTCACCAGACGGATTTTTGATAAATTGGAGACAATGGTAGCAATCGGTTTGATTTTTGGTATGATTGTCGGATCTCTGGCGGGAACAATGCTGTTCTCATACAAAATCGGAAGCGAAGGAAAAGACGTGGTGTATTCCATAAAATCACACGTGGAAGAAAACAACATCGCTGAGAGAATCGGGTTAAAAAAATGGATGGATGACAACAATGTCCCCGCAATGGTGGATAAATACACCACCCAGTTTTATCAAACCGTATACGAACAAATTGATACTTTAGCAATACAATATAACGTGACAGAAATCGTTGAAGAAATGAAACATATAATCGCACCCAGTATTATAAACCGCTCGAATTCCACCACACCTTCAACCGCAATAGCAATTATAAACCCGTACACAGAAAAGATTCAAATTTTGAGAAAAAAAGTTATAAATCGCGAATGGGCTGCAATTTATCCAGAAGTAAACGGTTTATTCAAAGACGCACGTGTCAGTAGGGAAGATATGATTAAGAACGCTAAAGCAATCGCATTTCAAGGAAAAAATGTGTTACAACGTGTTCTTGCAAGTAGTAAATCAATCGTTGGTGGTAGTACAAAGATTGTTTTTGTGATTGTCGGATCGATTGTCTCCGGGGCAGCGGGTATTTTAAATTTTGTGTCCCAATCAATGGTTTTCACAGGGGTTTTATACTCTTTAATAACATCGGATTCAGGTGGGGTTACCGAACAAGTTATGTACATGATTCCAATTTCAAGATCCGCTAGAATACGAAGTGTTGAAGTTCTTGATAAGGCTATTTCCGGGGTTCTTTTAGCGACAGTTGAGATCGCGTTCTTTCAAGGGTGTCTTACGTGGCTTTTGTTTAGATTGTTTAATATTCATTTTTTGTACATGTCGACTTTTCTCGCGTTTATCAACCCTTTACTCCCGATATTTCCGTATTTCTTCTCGACTATTCCAGCAGCTTTGCAGTTGGTTTTAGAAGGGAGATATGTAGTTGCTGTTTGTTTGTCGATAATTCATCTTTTGCTTATGGATTATGGTACTACTGAGATTCAAGAAGACATACCTGGTCATAGCGCGTATCTTACTGGGCTTAGTATCATTGGTGGAGTCGCATTATTCCCATCTGCATTGGAGGGGGCGATAATGGGGCCATTGATAACAACTGTTGTTATTGCTCTTAAGGATTTGTATGTGGAATATGTTTTGGGTGAACAGAAGAAAAGCAAAAAGGAGTAA 1974 41.03 MELVPYSDPNTNFNSSASPPWQDMFRSASTRQPDPSPEPQLNPQSPTDSPESTTNSDRDDSSPISGDPQVRLALYIAMAHAGLAFAIVVIYGVSKLLEEYLRPILWAVLCSIPLRGIQQTLVSFWSEPLKLGLTETVLAIPVYVYTVFIGNLVEIKDFLSKLILRKKKKEVAKRKRSGFSILLRWLVSFWVFVMAYEQLGVFGAIALLALGFMFTSRHVKSTMSAVSSFGGRTLNQNRHAAFLTRRIFDKLETMVAIGLIFGMIVGSLAGTMLFSYKIGSEGKDVVYSIKSHVEENNIAERIGLKKWMDDNNVPAMVDKYTTQFYQTVYEQIDTLAIQYNVTEIVEEMKHIIAPSIINRSNSTTPSTAIAIINPYTEKIQILRKKVINREWAAIYPEVNGLFKDARVSREDMIKNAKAIAFQGKNVLQRVLASSKSIVGGSTKIVFVIVGSIVSGAAGILNFVSQSMVFTGVLYSLITSDSGGVTEQVMYMIPISRSARIRSVEVLDKAISGVLLATVEIAFFQGCLTWLLFRLFNIHFLYMSTFLAFINPLLPIFPYFFSTIPAALQLVLEGRYVVAVCLSIIHLLLMDYGTTEIQEDIPGHSAYLTGLSIIGGVALFPSALEGAIMGPLITTVVIALKDLYVEYVLGEQKKSKKE 657
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cien5g03674 657 PANTHER TRANSMEMBRANE PROTEIN 24 654 IPR002549 -
Cien5g03674 657 MobiDBLite consensus disorder prediction 7 35 - -
Cien5g03674 657 MobiDBLite consensus disorder prediction 45 63 - -
Cien5g03674 657 MobiDBLite consensus disorder prediction 1 64 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cien5g03674 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
66601 Cien5g03674 Cien9g01854
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cien Cien-Chr8:12642759 Cien5g03674 Cien-Chr5:83192954 transposed
Cien Cien-Chr8:25608876 Cien5g03674 Cien-Chr5:83192954 transposed
Cien Cien-Chr5:83192954 Cien9g01854 Cien-Chr9:36446080 wgd