AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g00176 ATGTCTGAAAACAGCAGTAGTACAATTAGCAGCAGTCCAGATTTTAGTTTACCTGATGAAATACTATCAGTGATTCCAACTGATCCTTATGATCAGTTGGATCTTGCTCGCAAGATCACTTCCATGGCGATTGCTTCGCGCGTTTCGAAATTAGAATCCGAAGCGGATAAATTACGACAAAATTTGAATGAAAAAGATCGGTCTATTTTCGAACTTGAAGCCAAAGTTTCTGAGTTGAAACAGACTTGTCATAATGTTCAGTTGCGGTTGCAGCTTACACTTGAAGATAATGCAAAACTGGTGGAGGAACGAGATTCGTTAGCTATGACTACGAAGAAATTAGGGCGCGATTTAGCTAAGCTGGAGACGTTCAAACGACAATTAATGCAGTCATTAAACGACAATGATTCAACTCAATCAGCAACTATAGATATACGAACATATGACCAATCTGCCACCAGGGCTTATTCGGTTAAAGAAGAGGAGACTAACGGTTATAGAAGGCACCGCTCTTTTAGTGGCTCTACAGATGGACATATACCTGATGACGCCTCAAAGCATGCTGGTCAAAGGTTTTCTGTGACACCATACATGAGTAACCGTGTAACACCAAGTGGAACTCCAAAAACAATCTCTACAAGTGTGTCTCCTAGAAGATATTCTGCTTCTGGTACTACATCCCCAACAAAAAGCCAATATGAAGGGCGTAGTACAATGTCATCATGGTACTCATCGAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGGTCCCCCACTGCCAGGCCGTGCCTCCAAAATTGATGGAAAGGAGGTCTTCCGTCAAGCAAGGAGTCGTCTATCTTATGAGCAATTCAGCGCTTTTTTAGCAAATATAAAGGAGTTAAATGCTCAAAAGCAATCCCGTGAGGAGACTTTGAAGAAAGCAGAAGAAATATTCGGAACTGATAACAAAGATCTGTATTTATCATTTCAAGCTCTGCTAAATCGCAATAAGCAATAA 1005 41.29 MSENSSSTISSSPDFSLPDEILSVIPTDPYDQLDLARKITSMAIASRVSKLESEADKLRQNLNEKDRSIFELEAKVSELKQTCHNVQLRLQLTLEDNAKLVEERDSLAMTTKKLGRDLAKLETFKRQLMQSLNDNDSTQSATIDIRTYDQSATRAYSVKEEETNGYRRHRSFSGSTDGHIPDDASKHAGQRFSVTPYMSNRVTPSGTPKTISTSVSPRRYSASGTTSPTKSQYEGRSTMSSWYSSSQQSSAGNSPPRGPPLPGRASKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLKKAEEIFGTDNKDLYLSFQALLNRNKQ 334
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g00176 334 Coils Coil 48 89 - -
Ecan3g00176 334 MobiDBLite consensus disorder prediction 156 269 - -
Ecan3g00176 334 Coils Coil 293 313 - -
Ecan3g00176 334 MobiDBLite consensus disorder prediction 192 254 - -
Ecan3g00176 334 PANTHER OS03G0659800 PROTEIN 14 332 - -
Ecan3g00176 334 MobiDBLite consensus disorder prediction 160 186 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g00176 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:1709770 Ecan5g02150 Ecan-Chr5:34918193 dispersed