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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan8g02658 ATGGGTGCTTGTGTTTCACATCACCATCATAATAAGGCTTATAATTCTGAAATGAAGAAGAAGGTGCCATTTAATAATTCTTATTCTAATGACAATATTAAACAACATTATGATCAAAATAAGGCGGTGATCACTGATCATAATTCTAGTACTAGTAATTATAATAATAATACAAAACTAGTACTTACCTTCATGGATGGTCATGTTGCTGTTAAACCTCAACTTCCTCCTTCTCATCAGTCACCTGCTACTTTTTCTGATCATGGTAGCAAGGAGGAGACCTTTTTTGATTCCCAAGCATGGTTAGATTCAGATTGTGAAGACGAATTTATGAGCGTTAATGGTGAGTTTACCCCGTCAAGAGGCAATACACCGGTACACCCTAGCCTGACTCTAGGAAAACCACATCAAGTCATTGGAGGAGTCACTTTTATGGAAAAGAATGACCCTTTTGTTTCCAAACCTCAGCCATCGCCGACTCCAACACAGAAGAAGTTCAGTCTTTTGGAACTTTTCAAACGAAGCATAAGAGACAACCGTGATTTAACTGAGGTGATTGCTGAACCACCCAACAAAGATGGTCATATGGAAACGGATGATGCTAATTTGAAGCAGAGTAGGGAAGCACATTTGGATTCTAGGCAATCAGGCTGTTTTTCGAGTTTGCTTTCTGTGCGTAGCACTGGAAGGCAGAAGAAGAAAAGCCTAAACGTAGCCCAAAGCGCAGTTTTTGATGAATGA 741 39.54 MGACVSHHHHNKAYNSEMKKKVPFNNSYSNDNIKQHYDQNKAVITDHNSSTSNYNNNTKLVLTFMDGHVAVKPQLPPSHQSPATFSDHGSKEETFFDSQAWLDSDCEDEFMSVNGEFTPSRGNTPVHPSLTLGKPHQVIGGVTFMEKNDPFVSKPQPSPTPTQKKFSLLELFKRSIRDNRDLTEVIAEPPNKDGHMETDDANLKQSREAHLDSRQSGCFSSLLSVRSTGRQKKKSLNVAQSAVFDE 246
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan8g02658 246 MobiDBLite consensus disorder prediction 187 215 - -
Ecan8g02658 246 MobiDBLite consensus disorder prediction 187 211 - -
Ecan8g02658 246 PANTHER OS01G0920100 PROTEIN 1 235 IPR038947 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan8g02658 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
83775 Ecan2g00694 Ecan8g02658
86022 Ecan6g02387 Ecan8g02658
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr2:8033351 Ecan8g02658 Ecan-Chr8:37532872 wgd
Ecan Ecan-Chr6:34323956 Ecan8g02658 Ecan-Chr8:37532872 wgd