AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00987 ATGCTGTGGGTGCAATCGACGGGCACATACATCAAAGCAAATGTTCCTTTAGCTGAACAGGCTAGATACCATAATAGGCGAGGTCTACTATCTCAGAATATCTTAGTTGCATGTACCTTTGACATGAAATTGGTGTATGTCCTTGCTGGCTGGGAGGGTTCCACCCATGATGGTCAATTGTTGAGAGATGCTGTTAGACCTAGAGCAGACAGGTTAACTGTACCTTCCGGTAAGTACTATCTTGCTGATGCTGGATTCCCAAATGTCACTGGGTTCCTCACACCATACCGTGGTGTGAGATACCATTTAAAGGATCATGCTGGTCTCACACCTAATAATGCGAGAGAATTATACAATTATCGTCACTCTTCGCTACGGAATGTCATCGAGAGGACGATTGGACTATTGAAGAGGAGATTTGCGTACCTTAGGAACGTTCCATTCTATAGTATTGATACGCAAACGAAAATTATACTGGCATGCTGTGCTCTACACAATTACATGCCGGATGGCGACCCGGATGACTTATGCAATGACGTCCATGTCACAAATGAGGAATATCATGATGATCTCCCTATAAACGATGAGCATATAGTCATTGCTTCTTCTACCTTGTGGACAGCTAAAAGGGATGCTCTAGCAGAGGCGATGTATGAAGAATACCAGCACATCACCATCAGCATTAGCTTTTGTAGCGTTTATGTTTTGTGTTTCTAG 717 43.38 MLWVQSTGTYIKANVPLAEQARYHNRRGLLSQNILVACTFDMKLVYVLAGWEGSTHDGQLLRDAVRPRADRLTVPSGKYYLADAGFPNVTGFLTPYRGVRYHLKDHAGLTPNNARELYNYRHSSLRNVIERTIGLLKRRFAYLRNVPFYSIDTQTKIILACCALHNYMPDGDPDDLCNDVHVTNEEYHDDLPINDEHIVIASSTLWTAKRDALAEAMYEEYQHITISISFCSVYVLCF 238
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00987 238 PANTHER UNCHARACTERIZED 8 187 - -
Eupl14g00987 238 Pfam DDE superfamily endonuclease 9 166 IPR027806 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00987 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:14965255 Eupl9g01500 Eupl-Chr9:31978677 dispersed
Eupl Eupl-Chr14:14965255 Eupl14g00995 Eupl-Chr14:15475778 proximal