AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01045 ATGGTTCTGTCGCAGAAGATCCACGAAGCCTTCAAAGGGACTGTTGAGAGGATTACTGGACCTCGTACGGTCTCTGCTTTCAAGGAAAAAGGGGTTCTTAGCGTCAGCGAGTTCATCATCGCTGGAGATAATCTCGTCTCCAAATGCCCTACCTGGTCTTGGGAATCAGGTGAGTCAAGCAAGCGCAAGTCCTACTTACCCCCTCAAAAGCAGTACTTGATTACTAGAAATGTGCCTTGTCTACGAAGAGCTGCATCTGTAGAGGAAGAATATGAAGCTGCAGGAGGGGAAGTTCTTCTTGATAATGAAGATAATGATGGCTGGCTGGCAACCCATGGGAAGCCTAAAGAAACCAAGTGTGATGAGGAGGAAAACTTGCCCTCCATGGAGACCCTGGAAATCAGCAAGAAAAAGACTATTCAGTCAATCTCCTCGTATTTTGGGGGTGAAGAGGAAGAAGATATACCTGACATGGCAGAGTATGAAGAACCTGACAACCTTATTGAGACAGACGCTGCAACACTGCAATCTACATATCTTGTGGCTCATGAACCTGATGATGACAATATTCTACGTACCCGAACCTATGACGTTAGCATCACGTATGATAAATATTATCAAACTCCTCGTGTGTGGCTTACTGGGTACGATGAGGTTCTGCATTTGATTCAATTGCCAAGCCAAGTACTAAAATCAAGGATGCTTTTACAACCAGAACTTGTACTTGAAGATGTTAGTCAAGACCATGCACACAAAACGGTGAGATATTTCTGCCAAATGTTTTATTTCTCATGCATGTTTGGAGAATCCATTTGGCATTTCTACCAAATGATGTCTTTTGGCACAGAAGGTGCCTTCTTGTCTTATCTATATTTTGCTTATATGATTTTAATGGTAGATGCAAAAAACCTGTTTCGGCGGAAAATTTATTTTTGTCATGTATGTTACATTGTGGAAAAAACTTATTTGATTGTTAATGGTAGAAAAATTCATTCAACTGACTAA 1005 41.39 MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWSWESGESSKRKSYLPPQKQYLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKETKCDEEENLPSMETLEISKKKTIQSISSYFGGEEEEDIPDMAEYEEPDNLIETDAATLQSTYLVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEVLHLIQLPSQVLKSRMLLQPELVLEDVSQDHAHKTVRYFCQMFYFSCMFGESIWHFYQMMSFGTEGAFLSYLYFAYMILMVDAKNLFRRKIYFCHVCYIVEKTYLIVNGRKIHSTD 334
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01045 334 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 3 255 IPR046962 GO:0000045(PANTHER)|GO:0000407(PANTHER)|GO:0000422(PANTHER)|GO:0005829(PANTHER)|GO:0019776(PANTHER)|GO:0044804(PANTHER)|GO:0141046(InterPro)
Eupl14g01045 334 Pfam Autophagocytosis associated protein, active-site domain 37 254 IPR007135 GO:0019787(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01045 K08343 ubiquitin-like-conjugating enzyme ATG3
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:17428547 Eupl14g01337 Eupl-Chr14:31107991 wgd