AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g01215 ATGTCAGATACATATAGATTATGTAGAGCTGTGTATGAGCAAGATGAAGATATTCTAGAACCTGTTCAAGATAAAAGAGAAGCAGATGAAGATGTTCCAGAACCTGTTGAAGATAGAAGAGAGGCAGACTTCAGAAAATTCTTAGAAGATGCTGAAACCCCTTTATACCCAGGTTGCACAAAGTATACGAGGTTATCTGCAATAGTAGCTTTATACAAGCATAAAGCTATGAATGGTCTATTTGATAAGAGTTTTAACGAACTTCTGGAGATATTGCATGACATGCTACCACAAGATAACACAATTCCTGAATCGATATACTCAACGAAGAAGTTACTCAAGTCATTTGATCTTGAGTACGAGAAGATACATGCATGTGTGAATGACTGTTGTCTATTTAGAAAGGATCTAGTAGAAATGGAGAATTGTCCAAAATGTGGTTCCTCTAGATGGAAATATATGAAGACATTGAAAGGATATGTTAGGAATCGTGCAAGACCTGAAGGTTGCATAGCAGAATGCTATCTCGCAGACGAGTGCATGAGGTTTTGTAGTGGATACATGAAGCAAGTAGATGAATTAGATGGTCCTAAAACTCGAAATCAAGATTTTGAAAATGATGTTATCCTTGAAGGTCATCCAATTTCTAAGGGAATATCAATTATATTGACTGATGAAATGGTACCGAGTGCTCATCGTTATGTGTTGTTCAATATGGCCGAAGTAGAACCATATTTAGAAATGCACTTGGAGGAGTTGAAACATTTGGACAGACGTCTCTTAAGAAATGAAAGCTTACTTTGGAAGAAACACGATGATAATTTCTCTGCATGGTTCAAACAAAAGATTGAGGTTCAGAGTACTAGTGTCTCCAAAACATTAAAGTGGCTTGCGTATGGCCCTAGAAAGGATGCAATGTCATATTCTGCGTATGTTATCAATGGGCAACGATTCCACACAAAGGATGCTGAGAAGTCTACACAAAATAGTGGTGTTTCCATTGAAGCAACAACTATGTGTAGATCCAGTTCAAAGGACACAAACCAAATTGTTGATATAGTTGCTTACTATGGGGTCATAAAAGATATAATCTTACTTGACTACCACACTATTCAAATTCTTCTATTTAATTGTGATTGGGCAAACATTGGAAATGGTGTCAAAGTTGAAGATGGATTTACGTTGGTTAACCTCCACCAAGGACAAAACCGATTTGAAAGAGACCCATTTATTTTAGCATCACAGGCAAAGCAAGTGTTTTACTCTAGGGAAAGTGATTCATCTAGTTGGTATGTCCTATTAAAGGCACCACCAAGAGGTTTTCAAGAGTTAGAAATGTATGATGAGAATGTTGATATGCTATCCAGACCAGTAGATGTATCAAGACTTGACATGAGTATTGATGATGAAGATGGTAACTATAGTTCAAGAGAGGCAGTTAAAAGAGCAGAGAAAGAAAGATTATCTATCCAAGCTGCTCTTAGGAATGAATCCAATACTGGGATACATATATCAAATGGACCTTCCTCAGATATGCCTAACCCCTCAACGGAAGAACAACAAAAGTCCAAAAATAAACAGGGGCCTACAAAATATAAGGCAATGGCAACGGAAAGTGGAAAAAGGGTAGAGGTTAAATTTAATGAGAGGGGCCAAGCTATTGAATAA 1668 37.17 MSDTYRLCRAVYEQDEDILEPVQDKREADEDVPEPVEDRREADFRKFLEDAETPLYPGCTKYTRLSAIVALYKHKAMNGLFDKSFNELLEILHDMLPQDNTIPESIYSTKKLLKSFDLEYEKIHACVNDCCLFRKDLVEMENCPKCGSSRWKYMKTLKGYVRNRARPEGCIAECYLADECMRFCSGYMKQVDELDGPKTRNQDFENDVILEGHPISKGISIILTDEMVPSAHRYVLFNMAEVEPYLEMHLEELKHLDRRLLRNESLLWKKHDDNFSAWFKQKIEVQSTSVSKTLKWLAYGPRKDAMSYSAYVINGQRFHTKDAEKSTQNSGVSIEATTMCRSSSKDTNQIVDIVAYYGVIKDIILLDYHTIQILLFNCDWANIGNGVKVEDGFTLVNLHQGQNRFERDPFILASQAKQVFYSRESDSSSWYVLLKAPPRGFQELEMYDENVDMLSRPVDVSRLDMSIDDEDGNYSSREAVKRAEKERLSIQAALRNESNTGIHISNGPSSDMPNPSTEEQQKSKNKQGPTKYKAMATESGKRVEVKFNERGQAIE 555
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g01215 555 PANTHER DUF4216 DOMAIN-CONTAINING PROTEIN 152 413 - -
Eupl14g01215 555 Pfam Domain of unknown function (DUF4218) 152 201 IPR025452 -
Eupl14g01215 555 Coils Coil 480 500 - -
Eupl14g01215 555 MobiDBLite consensus disorder prediction 494 555 - -
Eupl14g01215 555 Pfam Domain of unknown function (DUF4216) 366 432 IPR025312 -
Eupl14g01215 555 MobiDBLite consensus disorder prediction 494 532 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g01215 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr10:4453008 Eupl14g01215 Eupl-Chr14:26707691 dispersed
Eupl Eupl-Chr11:20292609 Eupl14g01215 Eupl-Chr14:26707691 dispersed
Eupl Eupl-Chr14:26707691 Eupl4g01797 Eupl-Chr4:38019188 dispersed