Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl14g01239 | ATGGGGAGACTTCCACACAGCGGAGGCCCAGCCTTCCGCTTCACAGCCACTGAGGTGGCTGAGATGGAGGCTTGTTTGCAAGAAGCCAATAATGCAATACCAAGTCGTGAAGTTCTCGGCACTCTTGCAGAGAAGTTCAGTGCGTCAGCAGATCGAGCAGGAAAGATTGTTGTGCAATCGAAGCAGGTGTGGAATTGGTTCCAAAATAGAAGGTACGCTCAGAAGGCAAAATTGATTAAGGCTCCTGGGAAGCTAAGTGTATCGCCTATGCCTCGTGATGATTTGGTTCAAATGAGAAATGTGCCTCATTCCATACCCATTCCTTCAGGAAGGAATGCTTTGGATAATACTCAGATGGAGTTTGAAGCCAAGTCAGCTAGGGATGGGGCATGGTATGATGTTGCGACTTTTGTTTCTCATAGAATGTTTGAGACAGGTGATCCGGAAGTTCGAGTTCGGTTTTCAGGATTTGGGTCAGAGGAGGATGAGTGGGTTAATGTGCGCAAGCATGTGAGACAACGTTCTCTCCCTTGTGAAGCATCAGAATGTGTTGCCGTACTTCCTGGAGACCTCATTCTTTGTTTTCAGGAAGGTAAAGATCAGGCTCTTTACTTTGATGCGCACGTCCTTGATGCACAAAGACGGAGACATGATGTACGAGGATGTCGCTGTAGGTTCCTCGTTCGTTATGATCATGATCAGTCTGAGGAAATTGTCCCACTGAGAAAGGTGTGCCGTCGGCCAGAAACTGATTACAGGTTGCAACTACTGCATGCTTCAAAGGAGTACACATCCGTGGACCTGCGGAGCACGGGGAAAGATCCTTCTCTTGTTGGCACTTCAAGGGATTTCAGTTCTGCAGATCAAAAGACAAGGAAGCAGTATAAACTGGAGGGGAATGCAGATGATGTGGTTTTGGTGACTCCCTCTTCTCATGCCAAAGAGCCCATAACCATGGAAACTACACTGGCAGCAACAATGAAGGCTGAAAATTGTAGTGATAATAATATGGGAACTTCTGATGACCGTACTGGTGATGCTGCGTTGACAGTTGGCACGGCCACCAGCACTGGTACTGGCTCTGGCATGAGTGAAAATATGGAAGAAGGAAGCTAG | 1116 | 47.49 | MGRLPHSGGPAFRFTATEVAEMEACLQEANNAIPSREVLGTLAEKFSASADRAGKIVVQSKQVWNWFQNRRYAQKAKLIKAPGKLSVSPMPRDDLVQMRNVPHSIPIPSGRNALDNTQMEFEAKSARDGAWYDVATFVSHRMFETGDPEVRVRFSGFGSEEDEWVNVRKHVRQRSLPCEASECVAVLPGDLILCFQEGKDQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQLLHASKEYTSVDLRSTGKDPSLVGTSRDFSSADQKTRKQYKLEGNADDVVLVTPSSHAKEPITMETTLAATMKAENCSDNNMGTSDDRTGDAALTVGTATSTGTGSGMSENMEEGS | 371 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl14g01239 | 371 | Gene3D | - | 116 | 177 | - | - | |
| Eupl14g01239 | 371 | Gene3D | - | 10 | 82 | - | - | |
| Eupl14g01239 | 371 | Gene3D | - | 178 | 250 | - | - | |
| Eupl14g01239 | 371 | ProSiteProfiles | 'Homeobox' domain profile. | 13 | 77 | IPR001356 | GO:0003677(InterPro) | |
| Eupl14g01239 | 371 | SMART | HOX-1 | 7 | 81 | IPR001356 | GO:0003677(InterPro) | |
| Eupl14g01239 | 371 | MobiDBLite | consensus disorder prediction | 268 | 285 | - | - | |
| Eupl14g01239 | 371 | SUPERFAMILY | Homeodomain-like | 6 | 75 | IPR009057 | - | |
| Eupl14g01239 | 371 | Pfam | SAWADEE domain | 118 | 245 | IPR032001 | GO:0003682(InterPro) | |
| Eupl14g01239 | 371 | PANTHER | PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 | 13 | 332 | IPR039276 | - | |
| Eupl14g01239 | 371 | MobiDBLite | consensus disorder prediction | 351 | 371 | - | - | |
| Eupl14g01239 | 371 | MobiDBLite | consensus disorder prediction | 268 | 292 | - | - | |
| Eupl14g01239 | 371 | CDD | homeodomain | 13 | 75 | IPR001356 | GO:0003677(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl14g01239 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr10:28924477 | Eupl14g01239 | Eupl-Chr14:27579602 | dispersed | |
| Eupl | Eupl-Chr14:27579602 | Eupl9g00208 | Eupl-Chr9:6966372 | dispersed | |
| Eupl | Eupl-Chr14:27579602 | Eupl8g01348 | Eupl-Chr8:34475611 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Eupl | SAWADEE | 1.7e-46 | CL0010 | TF | HB-other |