Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00110 | ATGGCAGAGAACAGAGAAGCATTGCTGAAGAAGGTTTACTATGAGAATTGCCCAGGTTGCAAGGTGGATCAACTTAATGAGACGCGAAGAGGAATACCTTTCAAAGAACTTTTTTATGTATGGATTGTGGTACTTGGCACTGCTTTGCCAATATCGTCTCTCTTTCCATTCCTATACTTCATGATAAGGGACTTCCATATTGCAAAAAGGGAGGAAGATATTGGATACTATGCGGGTTTTGTGGGATCTTCGTATATGTTTGGAAGAGCTTTGACTTCTGTTTTTTGGGGAGTTGTAGCTGATCGATATGGTCGAAAACCTGTTATAGTGATTGGCACAATTACAGTGGTTTTGTTCAACACACTCTTTGGCCTCAGTACAAACTTCTGGATGGCAGTTTCTATGAGGTTTCTTCTTGGAAGTTTGAATGGTCTACTTGGCCCAATAAAGGCATATGCTGCTGAAGTTTGCCGACAAGAACATCAAGCTCTGGGAATGTCACTTGTTAGTACAGCATGGGGCATGGGTTTGATCATTGGTCCAGCTCTTGGAGGTTTCCTTGCACAGCCTGCAGAGAAATATCCAAATATATTTTCTAAAGAATCTCTATTTGGGAGGTTTCCGTACTTCTTACCCTGCCTCTGTATATCAATCTTTGCAGTAGCTGTACTTATTGCTTGTTGGTGGCTTCCAGAAACATTGCACATGCATAATGGAAACAGCAAGGAAGGATATGACTCATACGAAGCTTTGGAGGCTCCATCCAATGGGTGTGATGTGAAAGCAAAGATACAAGAGACTGGCGGAAGAGGATCAGATTCTAAAGAAAACCTCTTAAAGAATTGGCCCTTAATGTCATCTATAATTGTATATTGTGTTTTCTCACTTCATGATATGGCCTATACAGAGATATTCTCATTATGGGCTGTTAGTCCTAGAAAGTATGGGGGATTGAGCTACTCAACTAATGATGTTGGTGAAGTTCTTTCAATCTCAGGCCTTGGCCTTCTACTCTTTCAACTTTTTCTATATCCGATGGCTGCGAAGATTCTTGGGCCCATCATGGTATCTCGCATTTCAGCGGTCTTATCCATACCATTGCTGTCAAGTTACCCCTTTATAGCTATGCTATCTGGGTTCGTCCTTTCAGTGTTAATAAATTGTGCATCTGCGTTGAAGAATGTTTTCTCTGTGTCAATTGTCACTGGATTATTCCTTCTACAAAACAATGCTGTGGCCCAGCACCAAAGAGGAGCTGCAAATGGCATTTCTATGACTGCACAGTCTCTTTTCAAAGCAGCTGGTCCAGCTGGAGGAGGTGCTATTTTTTCTTGGGCACAAAAGCGTAGGGATGCTTCCTTCCTCCCAGGTAATCTGATGGTTTTCTTCATCCTAAATGTGATTGAGGTGATTGGAGTGCTAATGACCTTCAAACCATTTCTAGCTCAACCACTTGAGTAG | 1461 | 41.89 | MAENREALLKKVYYENCPGCKVDQLNETRRGIPFKELFYVWIVVLGTALPISSLFPFLYFMIRDFHIAKREEDIGYYAGFVGSSYMFGRALTSVFWGVVADRYGRKPVIVIGTITVVLFNTLFGLSTNFWMAVSMRFLLGSLNGLLGPIKAYAAEVCRQEHQALGMSLVSTAWGMGLIIGPALGGFLAQPAEKYPNIFSKESLFGRFPYFLPCLCISIFAVAVLIACWWLPETLHMHNGNSKEGYDSYEALEAPSNGCDVKAKIQETGGRGSDSKENLLKNWPLMSSIIVYCVFSLHDMAYTEIFSLWAVSPRKYGGLSYSTNDVGEVLSISGLGLLLFQLFLYPMAAKILGPIMVSRISAVLSIPLLSSYPFIAMLSGFVLSVLINCASALKNVFSVSIVTGLFLLQNNAVAQHQRGAANGISMTAQSLFKAAGPAGGGAIFSWAQKRRDASFLPGNLMVFFILNVIEVIGVLMTFKPFLAQPLE | 486 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00110 | 486 | Gene3D | MFS general substrate transporter like domains | 35 | 474 | IPR036259 | - | |
| Eupl1g00110 | 486 | Pfam | Major Facilitator Superfamily | 40 | 436 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Eupl1g00110 | 486 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 36 | 484 | IPR020846 | GO:0022857(InterPro) | |
| Eupl1g00110 | 486 | CDD | MFS-SLC46-TetA-like | 40 | 478 | - | - | |
| Eupl1g00110 | 486 | FunFam | Protein ZINC INDUCED FACILITATOR-LIKE 1 | 35 | 476 | - | - | |
| Eupl1g00110 | 486 | PANTHER | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 | 31 | 478 | - | - | |
| Eupl1g00110 | 486 | SUPERFAMILY | MFS general substrate transporter | 35 | 477 | IPR036259 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00110 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:3729318 | Eupl1g00112 | Eupl-Chr1:3912382 | dispersed | |
| Eupl | Eupl-Chr1:3729318 | Eupl1g00111 | Eupl-Chr1:3841632 | tandem | |
| Eupl | Eupl-Chr1:3729318 | Eupl5g00170 | Eupl-Chr5:4394936 | wgd |