Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00168 | ATGGGGGAGAGGCCGTTCACTTACATTGGAAGAGAGAAGAACAGCGAAGCAAAGATGGCTAAGAGCAAAGTTCTTGTAGTTGGTGGCACAGGGTACTTGGGCAAGAGGCTCGTGAAGGCTAGTTTAGCCCATGGTCACGTTACGTACGTCCTTCATCGGCGGGAGATCGGTGTCGATATCGAAAAGCTCCAGATGCTCCTGTCGTTCAAGGAGCAAGGAGCCCAACTCATCGAGGGGTCATTTAGCGACCATCAGAGCCTCGTCGATGCCGTTAAACTAGTCGATGTTGTCATATGTGCCATCTCTGGTGTCCACATCAGGAGCCACCATATCCTCCTACAGCTCAAGCTTGTTGACGCCATCAAAGAAGCTGGAAACGTTAAGCGGTTCTTGCCTTCGGAGTTTGGCACGGACCCGGCACAGATGGTTGATGCTATGGAACCTGGAAGGGTGACGTTTGACGACAAGATGGTCATTAGGAAGGTGATCGAAGATGCTGGAATTCCTTTCACTTACGTCTCTGCAAACTGCTTTGCCGGATACTTCATCGGTGGTCTATGTCAACCGGGTAGGATCACTCCTTCTAGGGAAAGCGTGGTCATGTTGGGAGATGGCAATCAAAAAGCAATTTATCTGGACGAGGACGACATTGCCACGTACACCATTAAAACCATCAATGATCCTCGTACACTAAACAAAACGCTTTACCTCAGGCCACCAGAAAACATCCTCTCTCAGAGAGAAGTAGTCAAAATATGGGAGAAACTCATTGGGAAAGTACTGGACAAGTCCACCATCTCCAAGGAAGAATTTCTAGCTACCATGAAAGGCCAAGATCTTTCACAGCAAATTGGACTGACGCATTACTATCATGTTTTCTACGAGGGTTGCCTTACAAATTTCGAAATAGGCAATGACGGAGAGGAAGCGTCAAATCTTTATCCAGAGGTCAAGTACACCAGAGTGGAGGAATATCTGAAACGCTATTTATAG | 993 | 47.53 | MGERPFTYIGREKNSEAKMAKSKVLVVGGTGYLGKRLVKASLAHGHVTYVLHRREIGVDIEKLQMLLSFKEQGAQLIEGSFSDHQSLVDAVKLVDVVICAISGVHIRSHHILLQLKLVDAIKEAGNVKRFLPSEFGTDPAQMVDAMEPGRVTFDDKMVIRKVIEDAGIPFTYVSANCFAGYFIGGLCQPGRITPSRESVVMLGDGNQKAIYLDEDDIATYTIKTINDPRTLNKTLYLRPPENILSQREVVKIWEKLIGKVLDKSTISKEEFLATMKGQDLSQQIGLTHYYHVFYEGCLTNFEIGNDGEEASNLYPEVKYTRVEEYLKRYL | 330 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00168 | 330 | Gene3D | - | 176 | 326 | - | - | |
| Eupl1g00168 | 330 | CDD | PCBER-SDR-a | 23 | 325 | IPR045312 | GO:0016491(InterPro) | |
| Eupl1g00168 | 330 | PANTHER | PINORESINOL REDUCTASE-RELATED | 21 | 329 | IPR050608 | - | |
| Eupl1g00168 | 330 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 21 | 278 | IPR036291 | - | |
| Eupl1g00168 | 330 | Gene3D | - | 22 | 315 | - | - | |
| Eupl1g00168 | 330 | Pfam | NmrA-like family | 24 | 287 | IPR008030 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00168 | K21568 | pinoresinol/lariciresinol reductase [EC:1.23.1.1 1.23.1.2 1.23.1.3 1.23.1.4] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:5440039 | Eupl3g01920 | Eupl-Chr3:47807370 | dispersed | |
| Eupl | Eupl-Chr1:5428362 | Eupl1g00168 | Eupl-Chr1:5440039 | tandem | |
| Eupl | Eupl-Chr1:5440039 | Eupl1g00169 | Eupl-Chr1:5471576 | tandem |