AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00184 ATGGGGTCCCATGTCGACGTCGTTCCTCCTACCCACACTAAGGAAATCGAGACCAAGAGCGAAGAGAAAATCGATTATTTGAATCTTCCTTGCCCCATACCGTACGAAGAAATCCATCGAGAAGCTTTGATGTCCTTAAAGCCGGAACTTTTTGAGGGGTTGCGCTTTGACTTTACCAAGGGACTCAATCAGAAATTTTCACTCAGCCACAGCGTGTTCATGGGACCGATGGAGGTTCCTTCTCAGTCCACTGAGACCATCAAAATCCCTACCGCTCACTATGAGTTTGGGGCCAACTTTCTGGACCCAAAGTTGATGCTTTTTGGGAGGATTTTGACCGACGGGAGACTTAATGCAAGAATCAAGTGTGATTTGACTGATAACCTCACGTTGAAGGCTAATGCTCAGCTTACAAGTGAGCCTCATATGTCACATGGCATGGTCAATTTTGACTACAAGGGAAAAGACTCCAGAACTCAGTTTCAAATGGGGAATGGTGCCTTATTTGGTGCTAGTTACATCCAGAGTGTCACTCCACATTTATCTTTGGGCAGTGAAGTTTTTTGGGCTGGTCAACATCGGAAGTCCGGTATTGGTTATGCTGCTCGATACAACACTGATAAGATGGTTGCAACAGGGCAAGTTGCCAGCACCGGTATGGTTGCACTGAGCTACGTTCAGAAGATATCTGAGAAGGTTTCTCTAGCAGCAGATTTCATGTACAATTACATGTCAAAAGATGTAACAGCAAGTTTTGGTTACGATTACATACTTCGACAGTGTCGTCTAAGAGGGAAGATTGATTCCAATGGCTGCACGGCTGCTTTTCTTGAAGAGCGACTGAATATGGGTCTCAATTTTATTCTTTCTGCAGAGATTGATCATCGGAAGAAAGACTACAAATTTGGGTTCGGATTGACGGTAGGAGAGTAG 933 44.69 MGSHVDVVPPTHTKEIETKSEEKIDYLNLPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVFMGPMEVPSQSTETIKIPTAHYEFGANFLDPKLMLFGRILTDGRLNARIKCDLTDNLTLKANAQLTSEPHMSHGMVNFDYKGKDSRTQFQMGNGALFGASYIQSVTPHLSLGSEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKISEKVSLAADFMYNYMSKDVTASFGYDYILRQCRLRGKIDSNGCTAAFLEERLNMGLNFILSAEIDHRKKDYKFGFGLTVGE 310
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00184 310 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 15 309 IPR037930 GO:0005741(InterPro)|GO:0005742(PANTHER)|GO:0008320(PANTHER)|GO:0008320(InterPro)|GO:0030150(PANTHER)|GO:0030150(InterPro)
Eupl1g00184 310 CDD Porin3-Tom40 29 309 IPR037930 GO:0005741(InterPro)|GO:0008320(InterPro)|GO:0030150(InterPro)
Eupl1g00184 310 FunFam Mitochondrial import receptor subunit TOM40-1 25 308 - -
Eupl1g00184 310 Gene3D Porin 21 308 IPR023614 -
Eupl1g00184 310 Pfam Eukaryotic porin 31 303 IPR027246 GO:0005741(InterPro)|GO:0055085(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00184 K11518 mitochondrial import receptor subunit TOM40
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr1:5815800 Eupl5g00299 Eupl-Chr5:8917501 wgd