Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00184 | ATGGGGTCCCATGTCGACGTCGTTCCTCCTACCCACACTAAGGAAATCGAGACCAAGAGCGAAGAGAAAATCGATTATTTGAATCTTCCTTGCCCCATACCGTACGAAGAAATCCATCGAGAAGCTTTGATGTCCTTAAAGCCGGAACTTTTTGAGGGGTTGCGCTTTGACTTTACCAAGGGACTCAATCAGAAATTTTCACTCAGCCACAGCGTGTTCATGGGACCGATGGAGGTTCCTTCTCAGTCCACTGAGACCATCAAAATCCCTACCGCTCACTATGAGTTTGGGGCCAACTTTCTGGACCCAAAGTTGATGCTTTTTGGGAGGATTTTGACCGACGGGAGACTTAATGCAAGAATCAAGTGTGATTTGACTGATAACCTCACGTTGAAGGCTAATGCTCAGCTTACAAGTGAGCCTCATATGTCACATGGCATGGTCAATTTTGACTACAAGGGAAAAGACTCCAGAACTCAGTTTCAAATGGGGAATGGTGCCTTATTTGGTGCTAGTTACATCCAGAGTGTCACTCCACATTTATCTTTGGGCAGTGAAGTTTTTTGGGCTGGTCAACATCGGAAGTCCGGTATTGGTTATGCTGCTCGATACAACACTGATAAGATGGTTGCAACAGGGCAAGTTGCCAGCACCGGTATGGTTGCACTGAGCTACGTTCAGAAGATATCTGAGAAGGTTTCTCTAGCAGCAGATTTCATGTACAATTACATGTCAAAAGATGTAACAGCAAGTTTTGGTTACGATTACATACTTCGACAGTGTCGTCTAAGAGGGAAGATTGATTCCAATGGCTGCACGGCTGCTTTTCTTGAAGAGCGACTGAATATGGGTCTCAATTTTATTCTTTCTGCAGAGATTGATCATCGGAAGAAAGACTACAAATTTGGGTTCGGATTGACGGTAGGAGAGTAG | 933 | 44.69 | MGSHVDVVPPTHTKEIETKSEEKIDYLNLPCPIPYEEIHREALMSLKPELFEGLRFDFTKGLNQKFSLSHSVFMGPMEVPSQSTETIKIPTAHYEFGANFLDPKLMLFGRILTDGRLNARIKCDLTDNLTLKANAQLTSEPHMSHGMVNFDYKGKDSRTQFQMGNGALFGASYIQSVTPHLSLGSEVFWAGQHRKSGIGYAARYNTDKMVATGQVASTGMVALSYVQKISEKVSLAADFMYNYMSKDVTASFGYDYILRQCRLRGKIDSNGCTAAFLEERLNMGLNFILSAEIDHRKKDYKFGFGLTVGE | 310 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00184 | 310 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 | 15 | 309 | IPR037930 | GO:0005741(InterPro)|GO:0005742(PANTHER)|GO:0008320(PANTHER)|GO:0008320(InterPro)|GO:0030150(PANTHER)|GO:0030150(InterPro) | |
| Eupl1g00184 | 310 | CDD | Porin3-Tom40 | 29 | 309 | IPR037930 | GO:0005741(InterPro)|GO:0008320(InterPro)|GO:0030150(InterPro) | |
| Eupl1g00184 | 310 | FunFam | Mitochondrial import receptor subunit TOM40-1 | 25 | 308 | - | - | |
| Eupl1g00184 | 310 | Gene3D | Porin | 21 | 308 | IPR023614 | - | |
| Eupl1g00184 | 310 | Pfam | Eukaryotic porin | 31 | 303 | IPR027246 | GO:0005741(InterPro)|GO:0055085(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00184 | K11518 | mitochondrial import receptor subunit TOM40 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:5815800 | Eupl5g00299 | Eupl-Chr5:8917501 | wgd |