AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00570 ATGTCAACCACCTGTGAAGGAAAGAGTTCATGGCCCGAGCTTGTAGGCGTGAGAGGAGATGCAGCGGCTAGTACAATTGAGAGAGAGAATACACGGGTCGATGCTATTGTGGTGGTGGATGGAAAGGATAATGTTACAGGTGATTTCCGATGCGACCGTGTGTGGGTGTGGGTGAATGTCAAAACGTCTGGATTCAAGCATTTACAACGGCTGTACAAAGTATAA 225 47.56 MSTTCEGKSSWPELVGVRGDAAASTIERENTRVDAIVVVDGKDNVTGDFRCDRVWVWVNVKTSGFKHLQRLYKV 74
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00570 74 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 5 60 IPR000864 GO:0004867(InterPro)|GO:0009611(InterPro)
Fli3g00570 74 Gene3D Trypsin Inhibitor V, subunit A 1 65 - -
Fli3g00570 74 Pfam Potato inhibitor I family 8 60 IPR000864 GO:0004867(InterPro)|GO:0009611(InterPro)
Fli3g00570 74 SUPERFAMILY CI-2 family of serine protease inhibitors 4 61 IPR036354 -
Fli3g00570 74 ProSitePatterns Potato inhibitor I family signature. 11 22 IPR000864 GO:0004867(InterPro)|GO:0009611(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00570 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr3:14044870 Fli3g00577 Fli-Chr3:14411514 dispersed
Fli Fli-Chr3:14044870 Fli3g00571 Fli-Chr3:14088077 tandem