Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso10g02384 | ATGGAGGATGAGTATGCCAAACTTATCAGGAGGATGAATCCACCCAGAGTTACAATCGACAACGATTCGTCCTCAGATGCAACAGTTATCCAGGTTGAAAGTGTTAATAAGCATGGTAGTCTGCTGGAAGTTGTCCAAGTTCTTGCGGATTTAGATCTCGTTGTAAAAAAAGCTTATATTTCATCAGATGCTGGATGGTTCATGGATGTGTTTAATGTTATATGCAATGACGGAAGCAAAATTAGAGATGATGGGGTAGTCAGTTATATAAAACAGGTGCTTGAAAGTGATGCATTTTACGTACCATCACTGAATGGTTCAGTTGGATTGAAGCCATCGGATGATTACACCGTAATAGAACTAGTTGGAACAGACAGACCTGGATTATTATCTGAAGTGTCTGCAGTTCTAACAAACCTTGGTTGTAATGTGCTCAATGCTGAAATATGGACTCACAATGCCAGAGCTGCAGCTGTGGTACATGTCACGGATGATAAAACAAAGTGTGCAGTTGAAGACCCAAAGCGGCTCTTGACTATTAAGAAGCTTCTTTGTAACGTTCTCAAGGGAAACAATGATTTGAAGACTGCAAAAATGACACTTTCCACCCCTGGTTCCATGCACAGACAGAGAAGATTACATCAAATTATGTTTGCTGAGAGGGATTACGAGAAAGTTGAAGAAACAGAACCAGAAAAGGAAAATAAGTTGAGAACACATATTACGGTTTTAGATTGTGTTGAGAAGGATTACACAGTTGTTACTATGCATTGTAGGGATAGACCAAAGCTGTTGTTTGATATTATTTGCACTCTTACCGACATGGAATATGTAGTCTTTCATGGAGTGGTTCACACAGATAAAACGGAGGCTTTTCAGGAATATTACATTCGGCATGTTGATGGGAGTCCAGTAAGCTCAGAGGCAGAGCGAGAGCGTGTTATGCAATGTCTTGAAGCTGCAATTGAGAGGAGGACATCTGAGGCGCTAGAGCTAGAATTGTGCACAACAGATCGTGTTGGACTTCTTTCAGATATAACCAGAATCTTTAGAGAAAATAGTTTGTGTATAAAAAGAGCAGAGATTTCAACCGAAGGTGGAACAGCTAAAGACAAGTTTTACGTGACTGACATGACCGGTAACTACCCTGTTGATCCAATAACCATAGATTCTATTCGAAGACAAATCGGTCAACAAGCAGCACTTCATGTTAGATGGAATCCTACTCAAACATCAGACTCACGACCTGAAGAAACAACAATGGGCTTTCTCTTTGGAAGTCTGTTTAGAGGCCGAACGTTTCAGACTTTGAAATTAGTCGGCTCCTATTCCTGA | 1335 | 40.52 | MEDEYAKLIRRMNPPRVTIDNDSSSDATVIQVESVNKHGSLLEVVQVLADLDLVVKKAYISSDAGWFMDVFNVICNDGSKIRDDGVVSYIKQVLESDAFYVPSLNGSVGLKPSDDYTVIELVGTDRPGLLSEVSAVLTNLGCNVLNAEIWTHNARAAAVVHVTDDKTKCAVEDPKRLLTIKKLLCNVLKGNNDLKTAKMTLSTPGSMHRQRRLHQIMFAERDYEKVEETEPEKENKLRTHITVLDCVEKDYTVVTMHCRDRPKLLFDIICTLTDMEYVVFHGVVHTDKTEAFQEYYIRHVDGSPVSSEAERERVMQCLEAAIERRTSEALELELCTTDRVGLLSDITRIFRENSLCIKRAEISTEGGTAKDKFYVTDMTGNYPVDPITIDSIRRQIGQQAALHVRWNPTQTSDSRPEETTMGFLFGSLFRGRTFQTLKLVGSYS | 444 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso10g02384 | 444 | Pfam | ACT domain | 117 | 166 | IPR002912 | - | |
| Fso10g02384 | 444 | SUPERFAMILY | ACT-like | 326 | 400 | IPR045865 | - | |
| Fso10g02384 | 444 | Gene3D | - | 114 | 184 | - | - | |
| Fso10g02384 | 444 | ProSiteProfiles | ACT domain profile. | 118 | 199 | IPR002912 | - | |
| Fso10g02384 | 444 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 7 | 406 | IPR040217 | - | |
| Fso10g02384 | 444 | CDD | ACT-ACR-3 | 251 | 325 | - | - | |
| Fso10g02384 | 444 | ProSiteProfiles | ACT domain profile. | 331 | 412 | IPR002912 | - | |
| Fso10g02384 | 444 | SUPERFAMILY | ACT-like | 24 | 93 | IPR045865 | - | |
| Fso10g02384 | 444 | ProSiteProfiles | ACT domain profile. | 29 | 107 | IPR002912 | - | |
| Fso10g02384 | 444 | SUPERFAMILY | ACT-like | 113 | 173 | IPR045865 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso10g02384 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 94546 | Fso10g02384 | Fso10g02752 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr10:65854504 | Fso14g00540 | Fso-Chr14:7151066 | dispersed | |
| Fso | Fso-Chr7:4256646 | Fso10g02384 | Fso-Chr10:65854504 | transposed | |
| Fso | Fso-Chr8:48202651 | Fso10g02384 | Fso-Chr10:65854504 | transposed | |
| Fso | Fso-Chr10:65854504 | Fso10g02752 | Fso-Chr10:70151849 | wgd | |
| Fso | Fso-Chr10:65854504 | Fso8g02111 | Fso-Chr8:51509801 | wgd |