AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr4g03442 | ATGATTGATCAAGGAGACAGTAATGTGTACGAAAACGGATTGAAATTCGCTTACGGAATGAATCAGATGGATACCGGAGTGATTCCGATGTACGTTCCGTCGGTGTTGATCGATACAGTCTCGCCGGCTGGCGTTCCGATCTCGAGGAAACGATCTCGTGATTTATGTTCGTTTGGTCCGTCGGTTTCGTCGAACGGAAGCTTCACGTTTCTCGGTGAGGACATCTCCATGCAGATCTATCAACAGCAGTTGGAGATCGATCGGTTCATTGATCAGCATACGGAGAAGATGAGATCGGAGATCGAAGCGAGTCGGAGGATAATCACGATGCGATTGATCGCAGTAGCGGATGAAGGAATGAAGAGATTACGATCAAAAGAAGAACAAATCATGAAGATCGGAAGATCGAATCGTGCGTTAGAAGAAAAGGTAAAATCACTCACCGTAGACAATCAACTATGGCAACAAATGGCCCAATCAAACGAAGCTACAGCCAACGTTCTCCGGCGAAATCTCCACCAACTCCTAACACAATATCAACAACAACAGCAATATCCTCATCACGGCGGAGATGCCACCGGAGCGACGGTGGACGACGTGGAGTCCTGCTGCGGGAGCAATTACGACGATGAAAATCGCCACCGGCGCACGTTAGCGAAAGTAGATGTTGGTAATGAAGGTGGTGATGTGGATGCGTACTGTACCACAAATGGGGACAATAATGGCAGCAACAGATTGTGCAGAAAGTGTGGGAAAGAGGAGTTGTGTGTGTTGGTGCTTCCTGCAGACATCTGTGCATCTGTACAGTATGTGAATCCTCCATCAACGTCTGTCCCATCTGTAAATCTACCAAAAATGCCACTCTTCTTGTTAATATGA | 879 | 47.1 | MIDQGDSNVYENGLKFAYGMNQMDTGVIPMYVPSVLIDTVSPAGVPISRKRSRDLCSFGPSVSSNGSFTFLGEDISMQIYQQQLEIDRFIDQHTEKMRSEIEASRRIITMRLIAVADEGMKRLRSKEEQIMKIGRSNRALEEKVKSLTVDNQLWQQMAQSNEATANVLRRNLHQLLTQYQQQQQYPHHGGDATGATVDDVESCCGSNYDDENRHRRTLAKVDVGNEGGDVDAYCTTNGDNNGSNRLCRKCGKEELCVLVLPADICASVQYVNPPSTSVPSVNLPKMPLFLLI | 292 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr4g03442 | 292 | PANTHER | SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN | 61 | 261 | - | GO:0004842(PANTHER)|GO:0043067(PANTHER) | |
| Ftr4g03442 | 292 | Coils | Coil | 123 | 143 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr4g03442 | K19042 | E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ftr | Ftr-Chr4:117070619 | Ftr8g00711 | Ftr-Chr8:8364707 | dispersed | |
| Ftr | Ftr-Chr4:117070619 | Ftr4g03443 | Ftr-Chr4:117091788 | tandem | |
| Ftr | Ftr-Chr4:117070619 | Ftr8g00710 | Ftr-Chr8:8340198 | wgd |