AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01788 ATGACAACATCAATCTCAAACAACATGAAAAAACACATAAACACGATAAAGAAAGCCCTAATCCCATTATCAAACAACAACTACTACAGCGATGACGTCATTCACACTACGTTAAAAGACTGCAACATGGATTTTCAGGAGACATGTAAGAGGTTGAAGATGGTTCATGACGTCAGAGAGATTGCTGGGAAACATAGTGTTGATGATGTTTATGTTATGTTGAAGGAGTGTAATCTTGATCCTAATGAAGCTGCTCAAAGGCTGCTCTATATTGATACTTTTCACGAGGTTAAAAAGAAAAACGACAGGCGGAAATCTACTAGCAGTGATGAATTCGAGGAATATGGACGGGGACGGGGTAATCAGTGGCGGGGACCTAGAAATGGTGAGCGAGGGAATTTTTACCCATCAAAAGTTAATAATGATGCTGGAGGTGGGAGAAATGTGAACTCAAGAAAGGAATATGTTGCTGTTACTAATCATGTAGAGAAGGTTTCGAGGCAGACATTGCCGGTTGATTCTGGAAAACAAAACGGACACATGGCAACATCTGCTTCCAAGATTAATGGCACACCGGCTGTATCCAACGGGAGTCACAGTTCAAAGCTTGCACCCAAAGTGCCTTCATATTCTGAAGCGGTTTCTGTGGGTGGCATAAAATGTGCAGTTGTAAAACGTGAGAGCTGTAGCAAGAATGGTAGTACCCCAGGTAGCAAGAAGTTTAGTGCTGATCAAGCAGGTGCTGGGATTAGTCCAGTTATTGCAGAAGCTGCGTCTGGGATTAGTCCAGTTATTGCAGCAGCTGCGTCTGGGATTAGTCCAGTCATTGCAGAAGCTGCGTCTGGGATTAGTCCAGTCATTGCAGAAGCTGCGTCTGGGATTAGTCCAGTCATTGCAGAAGCTGCGTCTGGGATTAGTCCAGTTATTGCAGAAGCTGCGTCTGGGGTTAGTCCGGTCATTGCAGAAGCTGCGTCTGATGTAGTTGTAGAGAATCAGATTACTGAATCATCGTTTACAACCCAGAACAGTTCACATGTTGTCATCCCCACTCCGGAAAACCAGCCTGCAAAAGCGGCTGTCTCGGAGCTCACCACGGCTCCCATCATCGATACTCATCCAACTTCTGAAGAAGATACTGAGTTGAAACTATCATCTCCAAAACTATCATCTAGGCAACCTGTTATTTTCCCTGATCATCTCCAAGTTCCTGAATTGTATAAAAATCAGTTTGTATTTGGAAGCTTGGATGCTACTTCTGAGGATTCTGGACCTATATCCGTGATTGATGATTCCGGATCTGTATCCGTGATTGATGATTCCGCCGTGATTGACGATTTCGGACCTATATCCGCGATTGAATCTACTCATCAAAATGGTGATGTTGTCACAGAACCTTCTTTGAGCGACCAAAATGTTCCAACAGCAGCTCAGGAAGTCAAACATGAAGATCATGCGCTACCAGATCTTTCTGATCATGTTTTGCCTGCACAGGAGAGCATCTCATCCGATTCTGCTTTAAAGCATGAGCAAACAGAGCAGGAGATGGTTTCCCCTATAGCAGGATTTCAAAATTTAGCCTTTCCAACTACCAGGGACTACAGTTATGGATTTATTCAACATCCGATAAGTCCACATTTTGTACAACTTGATGTACCTGAGCTCCAGAGTGTGAGTTCTCAAGTTGCGTGTACATTGGTCCCCACTTCTGCCGCACAACCTGCGATGGCAGGCCAGACCTCTATGGCGATGTCTCCACCTCAATTTCCTTATTACAGACAACCATACCCAGCCTACATTTCGTATAATCCATATTTCCATCCAATGTATTTTGCGCCTAATGCACAGCTGTTGAACCACGGTGTGTTCCCTCAGCAACCACCTCCTGTCAATGTACATATGCAACCAGGGGTAAAAGTGCCGGCTCCTCCTTCCCAGTCCGAACAGGAAAGCAACGAAGATCTTATTGCATCTCAAGCAAATGATACTAATGTTCAGTCCACTGTTCAACAGGGCGAAGGTCCCCAAGTTAGGGCTCATGCAGCTGGACAAGAAGTAATGCCCAGTTTACCACCCCATTATTTCTACAACTTCCCTCAAGCCCAGCACATGGCTTTCTCACCTTTCCAAGCTGGCCTCTATCATCCTTCTCAAACAATGACTTCTCAATCAGCTATACAACCACCACTCGTGTACCAAATTCAACCCACTAGTGGGACCATTGAACCTGTAATACAACCACCCAGTTCTTATCAACAGGCTGAGTCCGCGACACTGAACAGAGAGACCAATTGA 2292 44.85 MTTSISNNMKKHINTIKKALIPLSNNNYYSDDVIHTTLKDCNMDFQETCKRLKMVHDVREIAGKHSVDDVYVMLKECNLDPNEAAQRLLYIDTFHEVKKKNDRRKSTSSDEFEEYGRGRGNQWRGPRNGERGNFYPSKVNNDAGGGRNVNSRKEYVAVTNHVEKVSRQTLPVDSGKQNGHMATSASKINGTPAVSNGSHSSKLAPKVPSYSEAVSVGGIKCAVVKRESCSKNGSTPGSKKFSADQAGAGISPVIAEAASGISPVIAAAASGISPVIAEAASGISPVIAEAASGISPVIAEAASGISPVIAEAASGVSPVIAEAASDVVVENQITESSFTTQNSSHVVIPTPENQPAKAAVSELTTAPIIDTHPTSEEDTELKLSSPKLSSRQPVIFPDHLQVPELYKNQFVFGSLDATSEDSGPISVIDDSGSVSVIDDSAVIDDFGPISAIESTHQNGDVVTEPSLSDQNVPTAAQEVKHEDHALPDLSDHVLPAQESISSDSALKHEQTEQEMVSPIAGFQNLAFPTTRDYSYGFIQHPISPHFVQLDVPELQSVSSQVACTLVPTSAAQPAMAGQTSMAMSPPQFPYYRQPYPAYISYNPYFHPMYFAPNAQLLNHGVFPQQPPPVNVHMQPGVKVPAPPSQSEQESNEDLIASQANDTNVQSTVQQGEGPQVRAHAAGQEVMPSLPPHYFYNFPQAQHMAFSPFQAGLYHPSQTMTSQSAIQPPLVYQIQPTSGTIEPVIQPPSSYQQAESATLNRETN 763
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01788 763 PANTHER FLOCCULATION PROTEIN (DUF1296) 647 763 IPR044277 GO:0051082(PANTHER)
Glco3g01788 763 MobiDBLite consensus disorder prediction 99 120 - -
Glco3g01788 763 MobiDBLite consensus disorder prediction 171 205 - -
Glco3g01788 763 MobiDBLite consensus disorder prediction 740 763 - -
Glco3g01788 763 MobiDBLite consensus disorder prediction 99 150 - -
Glco3g01788 763 SUPERFAMILY UBA-like 53 108 IPR009060 GO:0005515(InterPro)
Glco3g01788 763 MobiDBLite consensus disorder prediction 171 206 - -
Glco3g01788 763 Pfam GBF-interacting protein 1 N-terminal 53 105 IPR009719 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01788 - -