AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean11g00726 ATGCAGAATGTGGATAGAAAATCGATCAAGAACAGTAATGTCGGTGATCAAAACAAGAATAAACGGAAGCGATTGCGATTAATTGCAGCTGTGATCGTAGGTATAGTTGCCGCATATCTTCATCAATGTTGGCATTCTCTCAGTTATTCAATCCTCCTTGAAACTTATATTTGTTCTAAGGATACTTGTGGCAATAAAGGCATAGTTGAGGAATGCTGTTGCGACTATGAGAGCATTAACGATATTAACGGAGCAGTTCTACATCCATTGCTACAAGAGCTTGTTAAGACTCCATTCTTTAGATATTACAAGGTTAAGTTATGGTGCGATTGTCTGTTCTGGCCCGATGATGGGATGTGCCGCATGCGCGATTGCAGCGTATGCGAGTGTCCAGAAAATGAATTCCCGGAGTCCTTTAAAAAACCATCACTGCATACTCTTCCAAACGATGACCCTGTTTGTCAAGAGGGAAAACCCGAGGCTACTGTTGACCGTACGCTCGATGCTAGATCGTTTAGAGGCTGGGTAGAAGTTGATAATCCGTGGACTCATGATGATGAAACTGATAATGGTGAAATGACGTATGTTAATCTGCAACTGAACGCTGAACGTTATACGGGTTATACAGGGCCATCAGCAAGAAGAATATGGGATGCTATATACACAGAAAATTGTCCAAAATATGCATATGGAGAGACATGCCCCGAGAAGAAAGTACTATTCAAACTAATATCCGGTCTACACTCTTCAATTTCAAGCCATATAGCTGCTGATTATCTCCTTGATGAGACTAACAATAAGTGGGGTCCAAATCTTAAATTGATGCGCGATCGTGTCTTGAAACATCATGATCGTGTTGAAAACCTGTACTTCACTTTCCTGTTTGTTCTTAGAGCTGTGACAAAAGCGGCTGCGTATTTGGATCAAGCGGAATATGACTCGGGTAATCATATGGAGGATTTGAGAGCTCAGTTGTTGATTCGGCAACTGGTTCACGATTCTAAATTGCAAGATGCGTGTGCTCTTCCGTTTTATGAGGCTGAACTGTGGCAAGGCCAAGGTGGGCCCATACTCCGGCAGCAGATTCAAAATCAATTTCGAAACATCAGTGCACTAATGGACTGTGTAGGGTGTGAGAAATGTCGTCTTTGGGGAAAACTTCAAGTTCTCGGGCTTGGAACTTCATTACAAATTCTCTTCTCTGTTGATGATCAGGGAAACCCGGACCCACACCTGCAGTTGCAAAGAAACGAAGTGATTGCTCTACTTAATCTACTAAATCGGCTATCGGAATCTCTTATATACGTTACTAAAATGAGAGATCAGATTGCGATAAACCCTCTGGCTAAAATAATCGGTTTAGTTCAAAGACAGTGGGGATCATCAATAGCCCATTGGTGGAAGAAGCTGTCAAAATCTAACTAA 1425 41.96 MQNVDRKSIKNSNVGDQNKNKRKRLRLIAAVIVGIVAAYLHQCWHSLSYSILLETYICSKDTCGNKGIVEECCCDYESINDINGAVLHPLLQELVKTPFFRYYKVKLWCDCLFWPDDGMCRMRDCSVCECPENEFPESFKKPSLHTLPNDDPVCQEGKPEATVDRTLDARSFRGWVEVDNPWTHDDETDNGEMTYVNLQLNAERYTGYTGPSARRIWDAIYTENCPKYAYGETCPEKKVLFKLISGLHSSISSHIAADYLLDETNNKWGPNLKLMRDRVLKHHDRVENLYFTFLFVLRAVTKAAAYLDQAEYDSGNHMEDLRAQLLIRQLVHDSKLQDACALPFYEAELWQGQGGPILRQQIQNQFRNISALMDCVGCEKCRLWGKLQVLGLGTSLQILFSVDDQGNPDPHLQLQRNEVIALLNLLNRLSESLIYVTKMRDQIAINPLAKIIGLVQRQWGSSIAHWWKKLSKSN 474
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean11g00726 474 SUPERFAMILY ERO1-like 74 443 IPR037192 -
Hean11g00726 474 PANTHER ERO1-RELATED 59 442 IPR007266 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(PANTHER)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0034975(PANTHER)|GO:0071949(InterPro)
Hean11g00726 474 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 87 434 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Hean11g00726 474 PIRSF ERO 25 472 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean11g00726 K10950 ERO1-like protein alpha [EC:1.8.4.-]
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Event-related genes

Select Gene_1 Gene_2 Event_name
101054 Hean11g00726 Hean3g02219
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr11:15532312 Hean13g00365 Hean-Chr13:15476213 dispersed
Hean Hean-Chr11:15532312 Hean3g02219 Hean-Chr3:122554214 wgd