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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00184 ATGAACAAATTCAAAGACAACGACTGGTTCCGAATCTCCGCCGCCAATCCGGAAGGTACACGATGGACTGGAAAGTGCTGGTATGTGCATAATCTGCTCAAGTATGAGTTTGATCTCCAGTTTGATATTCCGGTGACGTATCCGGCTACTGCTTCGGAACTTTCCGATCTAAGAAGCAGAGACACCAGTGCCACGTGGCTGGAGTCCGTCGCCTGA 216 50.0 MNKFKDNDWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATASELSDLRSRDTSATWLESVA 71
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00184 71 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 1 55 IPR014806 GO:0061657(InterPro)|GO:0071569(InterPro)
Hean1g00184 71 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 1 54 IPR014806 GO:0005737(PANTHER)|GO:0061657(InterPro)|GO:0071568(PANTHER)|GO:0071569(InterPro)|GO:1990592(PANTHER)
Hean1g00184 71 SUPERFAMILY UBC-like 2 53 IPR016135 -
Hean1g00184 71 Gene3D Ubiquitin Conjugating Enzyme 1 65 IPR016135 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00184 K12165 ufm1-conjugating enzyme 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr15:105007435 Hean1g00184 Hean-Chr1:4765811 dispersed