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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hean1g00326 ATGAGGCCTGGGCAAGTCCTCGGTTTGGTTGGAACAAATGGAATCAGAAAGTCTACAACTCTCAAAGTTTTGGCTGGAAAGTTGAAACCTAATTTGGGTCGTTTTAATGCAATCATAAAGCCACAATATGTTGATTATATTCCAAAAGTAGTTCAAGGGAATGTTGGACAGGTACTTGACCAAAAAGATGAGAGGGTTGTTAAGGCAGAGCTTTGTGTAGATCTTGAGTTGAATCAGGTTATTGATCGTAATGTTGGCGATTTGTCTGGAGGGGAGCTTCAAAGGTTTGCAATTGCTGTTGTTGCCATACAGAATGCTGAGATTTATATGTTTGATGAGCCCTCAAGTTATCTTGATGTCAAGCAAAGGCTTAAAGGAAAAGGTATTTATGTTATTTCACACCCTCTTTTAACTGAGAAAACTAACTGA 429 38.69 MRPGQVLGLVGTNGIRKSTTLKVLAGKLKPNLGRFNAIIKPQYVDYIPKVVQGNVGQVLDQKDERVVKAELCVDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKGKGIYVISHPLLTEKTN 142
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hean1g00326 142 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 2 125 IPR013283 GO:0000054(PANTHER)|GO:0005506(PANTHER)|GO:0005524(PANTHER)|GO:0006413(PANTHER)|GO:0006415(PANTHER)|GO:0043024(PANTHER)
Hean1g00326 142 Pfam ABC transporter 2 115 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Hean1g00326 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 134 IPR027417 -
Hean1g00326 142 Gene3D - 1 138 IPR027417 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hean1g00326 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hean Hean-Chr1:8735730 Hean7g00675 Hean-Chr7:42918545 dispersed