AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hetu33g01136 ATGTCAGAACATAGCACAGGTAGTACGGCCAGCGGTCCAGATTTCAACCTACCAGATGAAATACTATCTGTAATCCCTACGGATCCGTACGACCAGTTGGATCTTGCTCGGAAGATCACTTCAATGGCGCTAGCATCACGCGTGTCGAAACTGGAGTCGGAAGCAGGTATGTTGCGGCATAAGTTGAACGAACGAGATCGTGTTGTTATGGAGCTTGAAGAGAAAGTTTCGGAACTTCAACAGACGTGTCATAATGTTCAGTTGCGGTTGCAGCTTACGGTTGAAGATAATAGGAAACTTGTGGAGGAGAGAGATGCGTTGGCTGTGACTGCTAAGAAATTAGGGCGTGATTTAGCTAAGCTGGAGGCCTTCAAGCGACAACTAATGCAGTCATTGAACGACAATGATTCAACTGCGACATCAACTGTAGATATAGGCACCTATGACCAGTCTGCTCCTAAAGCTTATCCTGTTAAAGAAGAGGAGACAAATGGCTATAGAAGACACCATTCTTACAGTGGCTCTATTGATAGTGGAAACATACATGATGATGCCTCAAAGCTTGCTGGTCAAAGGTTTTCTGTGACACCGTATATCAGCACACGTGTAACTCCAACTGCAACCCCCAAAACAGCCTCTGCAAGTGTGTCTCCTAGAAGGTATTCTGCTTCTGGCACTACATCCCCAACAAAAATTCAATATGAAAGCCGTACAACAATGTCTTCATGGTACTCATCAAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGGGCCCCCTATACCAGGGCGCGCTACTAAGATTGATGGAAAAGAGGTCTTCCGTCAAGCAAGGAGTCGACTATCTTATGAGCAATTTAGTGCTTTTTTAGCAAATATAAAGGAGTTAAATGCTCAAAAGCAATCCCGTGAGGAGACTTTGAGGAAGGCAGAAGAAATATTTGGGTCTGATAACAAGGATCTTTATCTATCATTTCAAGCTCTACTAAATCGCAACAAACAATGA 1008 44.15 MSEHSTGSTASGPDFNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLESEAGMLRHKLNERDRVVMELEEKVSELQQTCHNVQLRLQLTVEDNRKLVEERDALAVTAKKLGRDLAKLEAFKRQLMQSLNDNDSTATSTVDIGTYDQSAPKAYPVKEEETNGYRRHHSYSGSIDSGNIHDDASKLAGQRFSVTPYISTRVTPTATPKTASASVSPRRYSASGTTSPTKIQYESRTTMSSWYSSSQQSSAGNSPPRGPPIPGRATKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGSDNKDLYLSFQALLNRNKQ 335
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hetu33g01136 335 Coils Coil 294 314 - -
Hetu33g01136 335 MobiDBLite consensus disorder prediction 160 179 - -
Hetu33g01136 335 MobiDBLite consensus disorder prediction 204 268 - -
Hetu33g01136 335 MobiDBLite consensus disorder prediction 204 255 - -
Hetu33g01136 335 Coils Coil 62 89 - -
Hetu33g01136 335 PANTHER OS03G0659800 PROTEIN 14 333 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hetu33g01136 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
300092 Hetu31g01016 Hetu33g01136
301075 Hetu32g01066 Hetu33g01136
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Hetu Hetu-Chr33:47500224 Hetu37g01569 Hetu-Chr37:91805479 dispersed
Hetu Hetu-Chr37:200179402 Hetu33g01136 Hetu-Chr33:47500224 transposed
Hetu Hetu-Chr34:124851304 Hetu33g01136 Hetu-Chr33:47500224 transposed
Hetu Hetu-Chr31:45062898 Hetu33g01136 Hetu-Chr33:47500224 wgd
Hetu Hetu-Chr32:49823650 Hetu33g01136 Hetu-Chr33:47500224 wgd