AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03941 ATGGCGATATTCGCGGGAAAATGCATTTATGGCGCTGCATTTGAGCTTCAGTCCAGAGTTTTCGTGAAGCCATGTAGGGCGATGATGATTATAGTCCGATGCTGTTCGAATTCGGATGAAAGCTCCATGAATTCCCCAGTTAGGTACACTCCTAAGAAATCTTTAAAATATAATAAAGTTAATGATTATACTCCGGCTGCAAAGGAATCCAAGAATTTCGAAGTGCGTCGATTCACAAACCCCGATTCATTGTATGTTGAGTTTTCAAATGCTGGAGAAAGATCCAGTATAGGATTTTCTGTGCACGAGAAATCACTGGATAACGATTTTAAGGAAGGCCATGTTATATCAAAAGAAAAGAAAACTTATAATTCAAATGTGAGATTAGAGGTCGGTGAACCTGATTACAAATGGAGATCTGCGGATTCAAAGGTTATGGAAGAAGCTGATGAATTTGATGCCATGGAAGGTCTTGATGAGGATTTAGATGAACATGATTCTCTTAATGGAGAATACGAAATCAAAAATCTCACAATTAAAACTAAAGAAGAAGCTGAGAAGACAGCAATTAGATTGCTTGGTGCAAGAGCATATACAGCACTTGAACTGAAGAAGAAACTGATAGGAAAGAAATTCTCCGATGAAGTTGTGAATGCTGTGATTTCTGACTTCCAAAACAGAGGATTTATCAACGATTTGTTGTATGCTGAATCATTTTCTCGATCAAGATGGTCTTCATCAAGTTGGGGTCCACGTAGGATCAAGCAGGCATTGGCCAAAAAGGGAGTTAATGATCTGGATGCACAGAAAGCAATAAAAGTGGTGTTAGAAGATGGGGAGTCTGTTCCAAAATTTGGGTTATCAAAGCCATCAATGGATCATCTGTTTGCCCAAGTTTCAAAGCAATGGCTTCGTGCTAAAGACCTACCAACTGAAAAACAAAAATCAAGAATCATCAATTGGCTTCAATACCGTGGTTTTAATTGGGGCGTTATTAACTTTATCTTAAAAAAGTTACAATCCGAGCATCCAGTGAAAACTGATGATGGGTAG 1053 38.46 MAIFAGKCIYGAAFELQSRVFVKPCRAMMIIVRCCSNSDESSMNSPVRYTPKKSLKYNKVNDYTPAAKESKNFEVRRFTNPDSLYVEFSNAGERSSIGFSVHEKSLDNDFKEGHVISKEKKTYNSNVRLEVGEPDYKWRSADSKVMEEADEFDAMEGLDEDLDEHDSLNGEYEIKNLTIKTKEEAEKTAIRLLGARAYTALELKKKLIGKKFSDEVVNAVISDFQNRGFINDLLYAESFSRSRWSSSSWGPRRIKQALAKKGVNDLDAQKAIKVVLEDGESVPKFGLSKPSMDHLFAQVSKQWLRAKDLPTEKQKSRIINWLQYRGFNWGVINFILKKLQSEHPVKTDDG 350
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03941 350 Hamap Regulatory protein RecX [recX]. 157 343 IPR003783 GO:0006282(InterPro)
Lssa7g03941 350 Gene3D - 290 346 IPR036388 -
Lssa7g03941 350 Gene3D - 231 273 IPR036388 -
Lssa7g03941 350 Gene3D - 184 229 IPR036388 -
Lssa7g03941 350 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 13 344 IPR003783 GO:0006282(InterPro)
Lssa7g03941 350 Pfam RecX, third three-helix domain 293 336 IPR053925 -
Lssa7g03941 350 Pfam RecX, second three-helix domain 231 271 IPR053924 -
Lssa7g03941 350 Pfam RecX, first three-helix domain 188 222 IPR053926 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03941 K03565 regulatory protein