Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi2g00118 | ATGAAGGAGCAGGTTGTCGCCGACGAGAAATCCGACGGTCTGGATATCGTTTCGATCGGAAAATTGTACGAAGGTCCATGGGAGAAGAAGTATTGGAGTTCATCCAGGGGTAAAGACAGGCATCCGTATCCAGTTGGCTATGTAGCTAATTGGGTCAATAATGGGAATACCTACAAGATGGCAATTCTTGAGGGACTTAAAGGACCTGAATTTGTGATTAGTTCCACGGATGGGCAATCATGTTCTGGTCAAACTCCAGATATTGCATGGGAGGGCTTTCAGAAGAAGAGCTGTGCTCGCATAAAGTTTTGGCGAGGAAAGAGATTTTCATGCAAGATAGATGGTGCAGAGCTTTTTGGGTTCAAGAATCTACATGTCATGAGATTACTGCGGGGATTGAAGGCAAATGTCAGCCAAGTCACAGAGAAAAGTTTGCAATCTTTGTCTTCTAGCAACAAACAGTCTGAAGGAACCCACGAATATCATACTAAGGATCCTGATTTGCAAGTGAATTTGGTTAAAATCCAGGGTAAAGAGAAAAAAAGGAATAAACGTAAAGAAATTCAAGTGAAATCAATTGATGGGCCTGAACCTAAAAGAGAGCAGCGTCCTCAAGATTTGAACCAAAGTAGTCATGAACCACATTGCAGGCAGAGTTATGAAGGAAGTCATAACGATGGGATTTGTTCAACTTCATCAAATTTAAATGGAAAAAATATAGCTCATATATTATCAGCAAAGGGAGAGAGGCAGTGTGATTCCCTTATTCTATCTGACAATCTTGATAGAGAGAAATGTTCTTCTGTCCCTGAAGCAGGCAATTTGATTGGTCCCAAAGATCTTACAATCACCGAAGAAGGTGCCAAGTTGTTAAAAAGCCAAGAAAATCATGACTTGTCGATGATTAGCCACACACCAGGGGTCACTTTCTCAAAATCGGTAGATGAAAAGAGAGATCCATCCCTTCGAAAAGAATCACATATGTTGGATGATGTGGACCTCTATGCACCTGATACTTTGGATCTAGCCTTAGACAGTGCATGCAATTTGGAGGTGGAGATCCCTGAAGAAAGTAAATGCACTTTAGATGACAAGTTAAATTCTACCCAAATTTTATTTTCTGAAAATTGTGTAACTGATTCTCCTTCAAAGGATGTGATGGTGATAGCTGCTGGAGGCGATCATTCTGAAAAGACTGATTCAGATCCAATTGGACAAGAAATATCCAACTCAATGATGGAATTACTGCTTCCGCGAGCTCTACCTCTGCTTAAAACTTTCAAAAGAAAGAAAAAGAAAAATCTTGATGGAATGTTCAAGGATAGAAAAGAGGTTAACCAATACCTAAAAGATGAATCTCCAGCCATATCTTCTGAGCACTTGGGAATGCTTAGCGGTGAAGGTCACATTCCAGACAAACCTTGTACTGAAAACTTTACATTTGAGAAGCAGAATGAAAATGATCTTTTCCCTAGTACAAATACGGGTGCAACTGAATGTACTTTAGAAGATTCAGCAACTGTTGCACCTGATAGTTTTGAGAATGACCAATGTGAAGTCATGGATTGCTCTCTGGCTGTTAAAGCTGATCAAAATGCTTTCAGTTTAGATTTATGCACCCGTGAAGGGCTCCATGAAGGAGTACAAGTTAGTGTTGGCAATGCGTCTTCTATGCTAAGTGTTGATCATGAAGCTCACAAGGGAATAATAGGTTCCATAGAAGGAGTTGATGCAGCAGTTCCACCATATCAAGAAGTAAATGATTTGATTCCAATTTTGCAAAGTCAAAGAATAAGTCATCCTGACAAGACTCAAATGGTGCACAATGATGAGGAAGTTAAAGTGGTGCCTATTGATGAACCAGTGAGTATCTTTGAACTTGTAGGCGGCTATATGTTTCCAACACCAATTTCAATGGCAATGTTGAGAACAAACGGCAATGAAGCATTTGCATGTGTTTTATGTGGCTATTTGATGGAAAACGAAAGGACTTTGTTCATTTACAAGACATCCATTAAAGGAGAAGCCAGAGGATGTCCGTCTTTTATTGGTCACACAAAAATTATCTCACCAACTTCAAGGAATGCATCTGGTAGACAAATTATTTTGGATAGTTCTAGTTTACAGTTTACTCCAGATGGAAAATCCCTTGTTTTACTAAGCAATATTAAAGTTCCTTACTGCAGGGAGGGCAGTGTGATCTGTGGGTGTTCAGTTTGTACATCAGATTGCTTCGAGAAGAATGCAGTACAAATTGTGCAAGTTAAAGTTGGCTATGTTCAAGTAGTATGCAAACTGAAAACAACCAACAATGTGTACTCCATATTAATTTGTGAACCTAATTATCTTGTAGCTTCTGAAGAGAGTGGAAAATTGAACTTATGGACCATGAACTCATCATGGAGTGCACCAACAGACCAGAGCTATTTGTCAACTTCTGATTGCATTCCTAACTGTATAGTTGAGATGAAGAGAATACCAAATTTTCCAGCTCTTATTGTTAGCCATAGTGCATCTGGGGATTTTTGCTTATGGGATTTATCAAGAAGAACCATTTTGTCCAAGTTTTCAGCTCCAAGAACTTCATTTCTCCCCTTCATTCCAGTCAATTTGTTTAGGTATCCTGGTCAGCCTTTAGCTACCTCAGATACATGTAGGAAGAAGCAAGTAGAAGACATCATGGAAGAAACACAAAGGTGGTCTTTAGAAACAGACAACCATAATTGTTTTCCAGTAAATGAAGAACATCTGTCACTTGTTCTTCTTGTCTCATCTGTATCGAATCTTGAGTTTGCTGATGAATATTCATATAAAGATTCGAGAGCCGGTTCAGCTGGATCATGGAGCCTAGCATTGTTGGCCAAAAACAAAGTGGTTTCTGAAAATGCTTTGGATCCAAGTGCCACTGTAGTTGGTGCATCATCAGGTTATGGAATCATTGGTACACGTGACGGTTCTTTGTACATTTGGGAATTAGCCTCAGGCACCAAGCTTGGTAATATCAGCCATTGCACCGAGGGAGAACAGCCTTTGGCTGTAAGGTTGTCATCAAAAACAAGCATGAAATTTTGCATGGCGGTTGTGAAAAGAAATGAAGAAGAGAGCAGCCCTGATGGGCTGAGCAGCAGATTCAATTGTCAGTGCCAATCAGCAGAAAAGAGACCATTGGGAAACAATTGGCGTGAGGCAATCAGAATTCGATCAAATCTGTGTGATTCAGATTGGGAACGATCGAACTTGGGATTGACTGGAAGCTGTGAGAGCTTCAATCAGGGTGACTGGGAGCTATGTACAAAGAAACAAAAGAAGGCAAAAGAGATGCAAGAGATGGATGCTGAAAATAACCTTTGTGTTCTAGAGAGCCACATCTAG | 3372 | 40.09 | MKEQVVADEKSDGLDIVSIGKLYEGPWEKKYWSSSRGKDRHPYPVGYVANWVNNGNTYKMAILEGLKGPEFVISSTDGQSCSGQTPDIAWEGFQKKSCARIKFWRGKRFSCKIDGAELFGFKNLHVMRLLRGLKANVSQVTEKSLQSLSSSNKQSEGTHEYHTKDPDLQVNLVKIQGKEKKRNKRKEIQVKSIDGPEPKREQRPQDLNQSSHEPHCRQSYEGSHNDGICSTSSNLNGKNIAHILSAKGERQCDSLILSDNLDREKCSSVPEAGNLIGPKDLTITEEGAKLLKSQENHDLSMISHTPGVTFSKSVDEKRDPSLRKESHMLDDVDLYAPDTLDLALDSACNLEVEIPEESKCTLDDKLNSTQILFSENCVTDSPSKDVMVIAAGGDHSEKTDSDPIGQEISNSMMELLLPRALPLLKTFKRKKKKNLDGMFKDRKEVNQYLKDESPAISSEHLGMLSGEGHIPDKPCTENFTFEKQNENDLFPSTNTGATECTLEDSATVAPDSFENDQCEVMDCSLAVKADQNAFSLDLCTREGLHEGVQVSVGNASSMLSVDHEAHKGIIGSIEGVDAAVPPYQEVNDLIPILQSQRISHPDKTQMVHNDEEVKVVPIDEPVSIFELVGGYMFPTPISMAMLRTNGNEAFACVLCGYLMENERTLFIYKTSIKGEARGCPSFIGHTKIISPTSRNASGRQIILDSSSLQFTPDGKSLVLLSNIKVPYCREGSVICGCSVCTSDCFEKNAVQIVQVKVGYVQVVCKLKTTNNVYSILICEPNYLVASEESGKLNLWTMNSSWSAPTDQSYLSTSDCIPNCIVEMKRIPNFPALIVSHSASGDFCLWDLSRRTILSKFSAPRTSFLPFIPVNLFRYPGQPLATSDTCRKKQVEDIMEETQRWSLETDNHNCFPVNEEHLSLVLLVSSVSNLEFADEYSYKDSRAGSAGSWSLALLAKNKVVSENALDPSATVVGASSGYGIIGTRDGSLYIWELASGTKLGNISHCTEGEQPLAVRLSSKTSMKFCMAVVKRNEEESSPDGLSSRFNCQCQSAEKRPLGNNWREAIRIRSNLCDSDWERSNLGLTGSCESFNQGDWELCTKKQKKAKEMQEMDAENNLCVLESHI | 1123 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi2g00118 | 1123 | MobiDBLite | consensus disorder prediction | 174 | 210 | - | - | |
| Mimi2g00118 | 1123 | Gene3D | - | 744 | 1038 | IPR015943 | GO:0005515(InterPro) | |
| Mimi2g00118 | 1123 | ProSiteProfiles | FYR domain FYRC motif profile. | 66 | 146 | IPR003889 | GO:0005634(InterPro) | |
| Mimi2g00118 | 1123 | MobiDBLite | consensus disorder prediction | 146 | 225 | - | - | |
| Mimi2g00118 | 1123 | SUPERFAMILY | WD40 repeat-like | 706 | 1003 | IPR036322 | GO:0005515(InterPro) | |
| Mimi2g00118 | 1123 | PANTHER | TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1 | 7 | 538 | IPR040092 | GO:0005634(PANTHER)|GO:0051726(PANTHER) | |
| Mimi2g00118 | 1123 | Gene3D | - | 10 | 137 | - | - | |
| Mimi2g00118 | 1123 | ProSiteProfiles | FYR domain FYRN motif profile. | 6 | 65 | IPR003888 | GO:0005634(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi2g00118 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr2:3054172 | Mimi2g00482 | Mimi-Chr2:28709024 | dispersed | |
| Mimi | Mimi-Chr1:100891542 | Mimi2g00118 | Mimi-Chr2:3054172 | transposed | |
| Mimi | Mimi-Chr2:3054172 | Mimi2g00146 | Mimi-Chr2:4750210 | wgd |