Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nenu1g00478	ATGGTACAGTTCCATGAACACATAATCTCAGACCTTCTCGAAGACTCGAATGGAGGTCTAGTCATTCTCTCATCCGGCCTCGCTCTCCACAAACTCATCGCCTCTCTCCTCCTCCTCCACTCCCCATCTCAAGGGACTCTTCTCATCCTCTCCGCATCCCCTTCTCAGAAGTCCTCCATCACCCAATCCCTTCAATCCCTCCAAAACCCTAATCCCAACCCCGATCTTCCCACCGAGATCACATCCGACCTCTCCGCCCAACTCCGCCACTCCCTCTACTCCTCCGGCTCCATCTTCTTCATCACCTCCCGGATTCTTATCGTCGATCTCCTCAACTCCAAAGTCCCCACCTCCAACCTTGCCGGTCTCATCATCCTCAACGCCCACAACCTCTCCGAGACCTGCACAGAGGCCTTTATTGTTCGTATTTTCCGCTCCCTCAATCGCACCGCCTATGTTCGTGCCTTCTCTGATAAGCCCCACGCCATGGTCTCCGGCTTCTCCAAGGCCGAACGGATCATGAAGTGCTTGTTCGTCAGGAGGTTGCATCTCTGGCCGAGGTTTCAGGTCTATGTATCTCAGGACTTGGAGAGAGACCCTCCCACGGTTGTGGATATTAGGGTTCAGCTGTCGCCCCTCATGAATGGAATTCAGAAGGCGGTAATTGAGGTTATGGATGCCTGCTTGAAGGAGATGCAGAAGACGAATAAGGTTGATGTTGAGGATTTGACGGTGGAGAAAGGGTTGTTTAAGTCGTTCGACGAGATCGTGAGGCGGCAACTGGATCCAATTTGGCATACGTTGGGAATGAAGACGAAGCAGCTAGTTTGGGATTTGAAGACTTTAAGGAAATTGGTGGATTATCTTGTCAGGTACGACGCAGTGGCTTTTTTGAAGTATTTGGATACTCTCAGAGTGTCAGAGGGTGTTCGGTCTGTTTGGATTTTTGCGGATTCAAGCCATAAGATATTTGAATTCGCGAAGAAACGGGTTTATCAGGTGGTGCGATCAGATGGTGTAAACCTGGCTGGGGAGTCTAAGAGTGTCGCGAGCAAGAGGAGGAAAGTGAAGGGGGATGCAAGTAATGAAAAAGATGCTAATGGGGATTCTGCTGGCACGAGTGCGAATTCTGGCATTGTGCTTGAGGAAATTTTGGAGGAAGCACCAAAGTGGAAGGTGTTACGTGAGGTATTGGAAGAGATAGCAGAAGAAAGACAAAATCAAGCTCTGTCAAGGGAAGGAGAACTTATGGTTGAAGGAGTAGAGGATAGCAGCCTTGTTTTGGTAGCTTGCAAAGATGAACGGTCATGCATGCAGCTTGAAGATTACATAATGAAGGGCCCACAGCAGGTCATGCGAGAAGAGTGGGAAAAGTACCTGTGGAGCAAAGTTGATCTGCATGGCTTACAAACACATAATAGAAAGAAATATAAGGAACCTAAAAGTTTTGGTGTATTTGATGGAAAATTTAAGGAACCTAAAGGTTTTGGCATTCTGAATGGAGTGCTTCCAAGTACACATGGGCAGAATGCAGAAACTGCCAGTATCAGCAAGCTGGAGCGTGATGCCTTATTGGCAGCAGCATCGGGGTTAAGTAATCCAGTAGCAGAAAATATTTCTGTTGGAGATAATCCTCCTACTCCTGGTGTTGGAGGATGTGGAAAGGGAAAAGTGAAGAGAAGGGGCAAAAAAGCTCTAGTAAATGCTAAGAGTTCAGGATGTGAAGACGATGTTAAGAAAAGAGAGAAAACCAATAGATCTGAAACATGTATATCTGACAATGAAGGCAAAAGTGGTGAAAATGACCCAGTAGAAGTGGATGATTTCAATAAAGGTGAAGATGGAACTCTATATATACAAAAAGGGTTTCTCCGGAAGCACAATCAAGGGGTTGATGCTAAAGGCTTGACTCATGCTAAGCCACTCCCACCAGTTCATTTTCATGCCCTAGAAAGTGAGCAGCATAATATACTTGATGATCTGAAGCCTTCTGTAATTGTTGTTTACCATCCAGACATGGCTTTTGTTAGGGAAATTGAAATTTATAAAGCAGAAAATCCATTAGCCAGATTGAAAGTTTATTTTCTTTTCTATGAAGACTCTACTGAAGTACAAAAGTTTGAGGCAAGTATTAGAAGGGAAAATGGAGCTTTTGAATCTTTGATAAGGCAGAAGTCACTAATGATTATTCCTGTTGATCAGGATGGTCGATGTCTTGGATTGACTAGCTCCTATGAGGCACAATCTCTTGCTTCACAAAACTCAGTAACTAGAAAGGCAGGTGGAAGGAAGGAAGTGGAGAAAGATATGCAGGTTATAGTGGACATGAGGGAGTTTGCAAGCAGCCTTCCAAATGTTCTCCACCAGAGGGGCATGCGCATTATACCAGTGACCTTGGAAGTTGGAGACTATGTCCTTTCACCATTAATTTGTGTGGAGAGAAAGAGTCTCCAAGATCTTTTTCAGAGTTTTTCGTCAGGTCGCCTGTATCACCAGGTGGAAACAATGGTCCGCTACTATCGCATACCTGTGCTTCTAATTGAGTTTTCACAAGACAAAAGCTTCTCCTTTCAGTCTGCAAGTGAGATTGGTGATGATGTTTCACCAACTAACATAATATCTAAGTTGTCATTGCTTGCTTTGCATTTTCCCCGCCTGCGCATTATCTGGTCCCGCAGCTTACACGCCACAGCTGAGATTTTTGCTTCACTAAAGGCAAATCAGGATGAGCCTGATGAGAGCAAGGCAATGAGAGTTGGTGTCCCCACGGACGATGGCATTGTGGAAAATGATGTGAGAGCTGAAACTTACAACACCTCTGCTGTGGAGTTCTTGAGGCGGTTCCCAGGGGTGACAGATTCCAACTACAGGGCTATTATGGATGGGTGTAATAGTTTGGCAGAACTTGCCCTGCTTCCTGTTGAGAAATTAACCGAACTAATGGGTGGTCAGAAAGCTGCTCGGACGCTGAGGGATTTCCTTGATGCCAAGTATCCATCCATGTTGTGA	3009	45.7	MVQFHEHIISDLLEDSNGGLVILSSGLALHKLIASLLLLHSPSQGTLLILSASPSQKSSITQSLQSLQNPNPNPDLPTEITSDLSAQLRHSLYSSGSIFFITSRILIVDLLNSKVPTSNLAGLIILNAHNLSETCTEAFIVRIFRSLNRTAYVRAFSDKPHAMVSGFSKAERIMKCLFVRRLHLWPRFQVYVSQDLERDPPTVVDIRVQLSPLMNGIQKAVIEVMDACLKEMQKTNKVDVEDLTVEKGLFKSFDEIVRRQLDPIWHTLGMKTKQLVWDLKTLRKLVDYLVRYDAVAFLKYLDTLRVSEGVRSVWIFADSSHKIFEFAKKRVYQVVRSDGVNLAGESKSVASKRRKVKGDASNEKDANGDSAGTSANSGIVLEEILEEAPKWKVLREVLEEIAEERQNQALSREGELMVEGVEDSSLVLVACKDERSCMQLEDYIMKGPQQVMREEWEKYLWSKVDLHGLQTHNRKKYKEPKSFGVFDGKFKEPKGFGILNGVLPSTHGQNAETASISKLERDALLAAASGLSNPVAENISVGDNPPTPGVGGCGKGKVKRRGKKALVNAKSSGCEDDVKKREKTNRSETCISDNEGKSGENDPVEVDDFNKGEDGTLYIQKGFLRKHNQGVDAKGLTHAKPLPPVHFHALESEQHNILDDLKPSVIVVYHPDMAFVREIEIYKAENPLARLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMIIPVDQDGRCLGLTSSYEAQSLASQNSVTRKAGGRKEVEKDMQVIVDMREFASSLPNVLHQRGMRIIPVTLEVGDYVLSPLICVERKSLQDLFQSFSSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASEIGDDVSPTNIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDESKAMRVGVPTDDGIVENDVRAETYNTSAVEFLRRFPGVTDSNYRAIMDGCNSLAELALLPVEKLTELMGGQKAARTLRDFLDAKYPSML	1002

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nenu1g00478	1002	MobiDBLite	consensus disorder prediction	573	606	-	-
	Nenu1g00478	1002	Pfam	ERCC4 domain	774	904	IPR006166	GO:0003677(InterPro)\|GO:0004518(InterPro)
	Nenu1g00478	1002	MobiDBLite	consensus disorder prediction	537	606	-	-
	Nenu1g00478	1002	MobiDBLite	consensus disorder prediction	351	374	-	-
	Nenu1g00478	1002	SUPERFAMILY	RuvA domain 2-like	933	998	IPR010994	-
	Nenu1g00478	1002	SUPERFAMILY	Restriction endonuclease-like	769	906	IPR011335	-
	Nenu1g00478	1002	Gene3D	-	771	917	-	-
	Nenu1g00478	1002	FunFam	DNA repair endonuclease XPF	771	915	-	-
	Nenu1g00478	1002	CDD	XPF-nuclease-XPF-euk	771	905	IPR047520	-
	Nenu1g00478	1002	Gene3D	-	929	1001	-	-
	Nenu1g00478	1002	SMART	ERCC4-2	771	851	IPR006166	GO:0003677(InterPro)\|GO:0004518(InterPro)
	Nenu1g00478	1002	PANTHER	DNA REPAIR ENDONUCLEASE XPF	2	1000	-	GO:0000014(PANTHER)\|GO:0000110(PANTHER)\|GO:0000712(PANTHER)\|GO:0000724(PANTHER)\|GO:0003684(PANTHER)\|GO:0003697(PANTHER)\|GO:0006296(PANTHER)\|GO:1901255(PANTHER)
	Nenu1g00478	1002	FunFam	DNA repair endonuclease UVH1	929	1001	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nenu1g00478	K10848	DNA excision repair protein ERCC-4 [EC:3.1.-.-]