Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nenu1g00646	ATGGAAAATGGCGGAAATGGATTATTCAGCGGCAATGGAGGAAGTGGCAGAGGGCAAAATAGTAATAACGTCAATCACTCGTGGGATATTTGGGAGCTGGGGACGTCTCGGTTCGATTGGAGCAACAACTCTTTCAACGCAGACGCTGTAACAACGACAACAACGACCGCAGTAGCAGCAGCAGCAGCAGCAGCGCATGCTATAATGTTTCCTCACCAGGGGGACAATGCGCACCACCACCACCACCTCCACCACTATCCGTCTCTGTACGCCACTGCGGCTTCCCACGTGCACCCTGATCCCCATCTCGCCTGTTTGAAGTTAGGCAAGCGACATTACTTCGAGGACGGTACGCCGTTGGGGGAGCGCCACGTACCCGGCTTCCCCATCGAGAAGAGGGGCAGATCCTATGATGTCGGCGTTGGTGTTGGCGGTCCGTCGTCGTCGACAACCGCGGCCGCTACTATTGCTGCTGCTGGAATGGGATCCCCGGTAGCGGTGCCCAGGTGTCAGGTGGAAGGCTGCCATGTCGCGCTTTTGAATGCCAAGGATTACCACCGGAGGCACAAAGTGTGCGAGATGCATTCCAAAGCGCCTAAGGTGGTGGTGCTTGGGATCGAGCAGCGTTTCTGCCAGCAGTGCAGCAGGTTTCATGTGGTATCAGAGTTCGACGATTCAAAAAGGAGTTGCAGGAGGAGATTAGCTGGTCACAACGAGCGAAGGAGGAAGAGCTCTAATGATTCTATTTCCAGGAACCAATCTCAAGAACAAAAATCAACGGGTGGAAGATTCTCGTGCATATCATCGTCGTCAGGACGTGCTCTCTCTCTTCTGTCATCCAAGTCTTCCTCCTGGATTTCTCCATCTGACCTCTCCTCTCGGTCTAGTGCTGCACTACGCGAGTTGATTGCAGAGAATCGAGCAGCAGCCCTCGCCCGGCAGCTCTTTTTGGACAGGGCCTGGCACCACCATGCGATGGATGAGTTGGGTGGCACCCAACCAGGAATAGTGCCTCACCCTCACCAACACCAACCATTCCCGGAATCAACCGAGTGGAACAGATTCCAAGACGGTGATGCCCATGTGACATTAGACCTGATGCAGATGCCAAGCTCGCCTTTCGGCTTCCTACCTGGCAAGACAAAGTCCAAGGAAGAGGAGGATGAATGCTGTGAGATATGGAAGTCTTTGGAGGGAACTCATGTCATCTGA	1212	54.04	MENGGNGLFSGNGGSGRGQNSNNVNHSWDIWELGTSRFDWSNNSFNADAVTTTTTTAVAAAAAAAHAIMFPHQGDNAHHHHHLHHYPSLYATAASHVHPDPHLACLKLGKRHYFEDGTPLGERHVPGFPIEKRGRSYDVGVGVGGPSSSTTAAATIAAAGMGSPVAVPRCQVEGCHVALLNAKDYHRRHKVCEMHSKAPKVVVLGIEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSNDSISRNQSQEQKSTGGRFSCISSSSGRALSLLSSKSSSWISPSDLSSRSSAALRELIAENRAAALARQLFLDRAWHHHAMDELGGTQPGIVPHPHQHQPFPESTEWNRFQDGDAHVTLDLMQMPSSPFGFLPGKTKSKEEEDECCEIWKSLEGTHVI	403

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nenu1g00646	403	MobiDBLite	consensus disorder prediction	1	21	-	-
	Nenu1g00646	403	MobiDBLite	consensus disorder prediction	234	265	-	-
	Nenu1g00646	403	FunFam	Squamosa promoter-binding-like protein 14	161	231	-	-
	Nenu1g00646	403	PANTHER	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	78	334	IPR044817	GO:0003677(InterPro)
	Nenu1g00646	403	Pfam	SBP domain	170	243	IPR004333	GO:0003677(InterPro)
	Nenu1g00646	403	ProSiteProfiles	Zinc finger SBP-type profile.	167	244	IPR004333	GO:0003677(InterPro)
	Nenu1g00646	403	MobiDBLite	consensus disorder prediction	248	265	-	-
	Nenu1g00646	403	Gene3D	-	162	231	IPR036893	GO:0003677(InterPro)\|GO:0005634(InterPro)
	Nenu1g00646	403	SUPERFAMILY	SBT domain	168	249	IPR036893	GO:0003677(InterPro)\|GO:0005634(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nenu1g00646	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Nenu	Nenu-Chr1:18103131	Nenu6g01118	Nenu-Chr6:38243744	dispersed
	Nenu	Nenu-Chr1:18086224	Nenu1g00646	Nenu-Chr1:18103131	tandem

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Nenu1g00646	.	126	249	SPL gene family	AT1G27370	50.36	4.41e-38	140.0
	Nenu6g01118	.	126	249	SPL gene family	AT1G27370	46.667	8.98e-38	139.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Nenu	SBP	1.1e-31	No_clan		TF	SBP