AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nenu6g01083 ATGACCAGTCGCCTCTTCTGCACACTGACCTTCCTCGCCTTATTCCTGTCCGTCGCGCAGGGGTTATTCAAGTCGGAAAAGTGCGTATACACGCTGTACGTGAAGACGGGAACCTTTCTCACGATAGGAACCAATGCCAAGATCGGCGTGACCCTGACTAACGCAAAGGGAAAATCGGTGCGGGTGCCGGATCTTCGGAAGTGGGGGATCATGGAACACGGCCACTCTTACTTTCAGCGGGGGAACCTTGACGTCTTCAGCAGCCGGGCTCCCTGCGTTGCGTTTCCTCTCTGCCAGCTGAACCTCACGGTCAGCGGGGGCACCCTGTTAAACAGCTGGTACTGCGAATATGTGGACGTGACGTCGACAGACCCCCATAAAAACTGCAGCAAGACCATCTTCGACGTCAAGCAATGGCTGGTTGCCGGCCATCTAAGCGCTTCAGTGGACAAATGCAATCGTAAGGTGCATTCTCCTCGAAATGGGACTCCGGTGGCCGGAAACGGCGTTCTAAGAGAAGGAGGATCTGCAGCCTCAGAATCACAGTGA 549 55.19 MTSRLFCTLTFLALFLSVAQGLFKSEKCVYTLYVKTGTFLTIGTNAKIGVTLTNAKGKSVRVPDLRKWGIMEHGHSYFQRGNLDVFSSRAPCVAFPLCQLNLTVSGGTLLNSWYCEYVDVTSTDPHKNCSKTIFDVKQWLVAGHLSASVDKCNRKVHSPRNGTPVAGNGVLREGGSAASESQ 182
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nenu6g01083 182 MobiDBLite consensus disorder prediction 155 182 - -
Nenu6g01083 182 SUPERFAMILY Lipase-lipooxygenase domain (PLAT-LH2 domain) 29 141 IPR036392 GO:0005515(InterPro)
Nenu6g01083 182 ProSiteProfiles PLAT domain profile. 28 154 IPR001024 GO:0005515(InterPro)
Nenu6g01083 182 Gene3D PLAT-LH2 domain 29 143 - -
Nenu6g01083 182 Pfam Embryo-specific protein 3, (ATS3) 24 125 IPR010417 -
Nenu6g01083 182 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 24 159 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nenu6g01083 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nenu Nenu-Chr6:37303930 Nenu6g01084 Nenu-Chr6:37329353 tandem