AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00576 ATGGCTCATGAAGAACATAACCCTAGCCTTCGGTGTGGTAATAGCAGCGGCGGTGGTGGAAGTGGTGGTTGTGCTGGTGGTAAGTTTTCTAAGAAATTGAAGCAGAACAAAGTGCCACAGAGAGGAATGGGTGTTGCTCAGCTTGAAAAGATTATATTAGAGGAGCGTCAGATGAAAGATTTGACACCTAATTCAACCAGTTTCAGGCCGCCGTCGATTACTCTACCGCCACCATTGCCGCCCAATCACCGCCTTTTGATTCCAGAATCTGAAGTCTTGAATCCAAATTCTGTGCCTAAGTCATTGCAGAAAAACAGTGGGAGTGGTAATAGTGTTAGTAGATTATTCAATTTTGAAGGTGAGAATCCGAATCAGAATCCAAATCCAAATCAGAATCACAATGGATACATGATGTCCCTGCCTCAAAATCATGGTGTATTTCCTTTTGAACCCTACAGGGCGATTTGGCCACCAGTTCCTATTATCACTCAACAATCAGATTTTCAGCAACCATGTTCTTCATCAATGATGAATGTCTCATTAGGAACTACATCAGCATCTTCATCTGTTATGAATTTTCAGATAGAGCCCCCTTCAATCCAAAGCTATTATGGCACCAAGTACACACATTTTTTGCAGGATGAAGACAAGGCGGTTGGCAAGAAAAGACCATATCCCTTTTCAATGGAGAATGTGCCAATTCCCTCTTTCATTTGCAAATTCCCTTCTTATGCCTCACCAGTTTCAAGATCAGATGAATCAACTTTATATGGCAATGGTAGCACTGGTAGTTTAGAATTTCATACTCCTGTTTCCAGAGAAATCCCTTCAAGCATAGGCTCCAAGAGGAACCAAAAGAGCGGAAAAGCTATTGGCGATCATCACAGTGTCACCAAAGATTTTCTCACATTGGGCCCTTCTCGATCACATTCAAGTCAAAGAAAGAAGTCGAGACCTTTATCTATAGGAGAACCAACTATATCGCCTTATCAAGGTCAAACTAGAGATTCACCTGGAACAGAACGGTCAAACCAACAGCCATTGCTTAGTTTCTTTCCAGCAGCAAAGACTCATGGAAACAGTAATGGTGAAGCTGAGGAAGATGTTGATCTGAATTTGAAGTTATAG 1128 41.84 MAHEEHNPSLRCGNSSGGGGSGGCAGGKFSKKLKQNKVPQRGMGVAQLEKIILEERQMKDLTPNSTSFRPPSITLPPPLPPNHRLLIPESEVLNPNSVPKSLQKNSGSGNSVSRLFNFEGENPNQNPNPNQNHNGYMMSLPQNHGVFPFEPYRAIWPPVPIITQQSDFQQPCSSSMMNVSLGTTSASSSVMNFQIEPPSIQSYYGTKYTHFLQDEDKAVGKKRPYPFSMENVPIPSFICKFPSYASPVSRSDESTLYGNGSTGSLEFHTPVSREIPSSIGSKRNQKSGKAIGDHHSVTKDFLTLGPSRSHSSQRKKSRPLSIGEPTISPYQGQTRDSPGTERSNQQPLLSFFPAAKTHGNSNGEAEEDVDLNLKL 375
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00576 375 MobiDBLite consensus disorder prediction 1 42 - -
Pdy4g00576 375 MobiDBLite consensus disorder prediction 361 375 - -
Pdy4g00576 375 MobiDBLite consensus disorder prediction 302 357 - -
Pdy4g00576 375 MobiDBLite consensus disorder prediction 250 375 - -
Pdy4g00576 375 MobiDBLite consensus disorder prediction 55 79 - -
Pdy4g00576 375 MobiDBLite consensus disorder prediction 250 268 - -
Pdy4g00576 375 PANTHER OS01G0212500 PROTEIN 11 375 IPR040356 GO:0003700(InterPro)
Pdy4g00576 375 MobiDBLite consensus disorder prediction 96 132 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00576 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
132689 Pdy4g00576 Pdy7g02210
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:10767238 Pdy7g02210 Pdy-Chr7:67083892 wgd