Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00038	ATGACTTCTTCTTCCTCAGCTTTCATTCTACTTTTGCTCTCTTTTCAACTATTTTCCTCCATTTCTGAAGCTGTGGTTCCTGCTTCAGAAACCTTCACTTACGTAAACGAAGGTGACTTTGGCGACTACATCGTCGAATACGATGCAAACTATCGTTTTCTCTCCCCTTTTAACACCCCATTCCAGCTTTGCTTCTACAACACAACCCCTAACGCCTTCACTCTAGCTCTCCGTATGGGTACGGTTCGATCGGAATCGCTCATGCGTTGGGTTTGGGAAGCTAACCGTGGGAAACCGGTTCGTGAAAACGCCACCCTCACATTCGGTACGGACGGAAACCTGGTCCTGGCGGATGCCGACGGACGGGTTGTCTGGCAGACAAATACCGCCAACAAGGGTGTGGTCGGTTTTCAGGTGCTTCCAACCGGTAACATGGTTCTTCACGACGGTAAGGGTAATTTCTTATGGCAAAGCTACGACTCCACAACCGACACTCTCTTGGTTGGCCAGACCCTCCGAGCTGGTGGTCCGAATAAGCTTGTGAGTCGGCTTTCGGAGGCGAACAACGTCGATGGACCGTACAGTTTGGTGATGGAGCCTAAAGGGTTATCCATGTACTACAAAAGTCCGAACTCGCCTCGACCAATGCTTTACTGGTCGTCTAGTGAATGGTTCACCGTTGACCAAGGTAGTTTGACCAATCTAACTCTCACATCGAACCCAGACACCGATGAGGGGTTTCTTTATTACTTGACATTCAATTACTTCACCACAAACCCAACATCATCTTCAAACCGCAACATGGCGTTTTCACGATACAACAACACGTTATCGTATCTTCGGTTAGGGATAGACGGGAACCTTAGATTTTATACGTATAACCCGAACGTGCAAGGGGTGGCGTGGGAGTTGGTGTACACGTTTCTTGATCGGGATTCAATGGAAGGCGAGTGTCAGTTGCCGGGACGATGTGGGAACTTTGGGTTATGTGAGGACAGCCAGTGTGTAGCGTGCCCGACCCCGAATGGGCTAAGCGGTTGGAGCAAAGATTGTGAGGTGAAAAAGGTGACGTCTTGCAAAGCTAGCGACTTTGGGTACTACAAGCTTGAAGGGGTCGACCATTTCATGATCAAGTACACGAGGGGAGATGGGGGGACCAAACAAAGCGATTGCGAGAGCAAATGCAGCAAGGATTGTAAGTGTATGGGGTACTTCTATCACACGGATAGTTCGAGGTGCTGGATTGCTTACGATTTGAAAACATTAACAAGGGTTGGGAACTCGACTCATTTGGCATACATCAAAACACCCAACAAGTAG	1320	48.71	MTSSSSAFILLLLSFQLFSSISEAVVPASETFTYVNEGDFGDYIVEYDANYRFLSPFNTPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGKPVRENATLTFGTDGNLVLADADGRVVWQTNTANKGVVGFQVLPTGNMVLHDGKGNFLWQSYDSTTDTLLVGQTLRAGGPNKLVSRLSEANNVDGPYSLVMEPKGLSMYYKSPNSPRPMLYWSSSEWFTVDQGSLTNLTLTSNPDTDEGFLYYLTFNYFTTNPTSSSNRNMAFSRYNNTLSYLRLGIDGNLRFYTYNPNVQGVAWELVYTFLDRDSMEGECQLPGRCGNFGLCEDSQCVACPTPNGLSGWSKDCEVKKVTSCKASDFGYYKLEGVDHFMIKYTRGDGGTKQSDCESKCSKDCKCMGYFYHTDSSRCWIAYDLKTLTRVGNSTHLAYIKTPNK	439

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00038	439	CDD	B-lectin	45	160	IPR001480	-
	Smso29g00038	439	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5	48	437	IPR051343	-
	Smso29g00038	439	CDD	PAN-AP-plant	358	437	-	-
	Smso29g00038	439	PIRSF	SLG	1	439	IPR035446	-
	Smso29g00038	439	SMART	blect-4	45	162	IPR001480	-
	Smso29g00038	439	SUPERFAMILY	alpha-D-mannose-specific plant lectins	70	220	IPR036426	-
	Smso29g00038	439	Pfam	D-mannose binding lectin	91	173	IPR001480	-
	Smso29g00038	439	Gene3D	-	36	160	IPR036426	-
	Smso29g00038	439	ProSiteProfiles	Bulb-type lectin domain profile.	29	160	IPR001480	-
	Smso29g00038	439	Pfam	S-locus glycoprotein domain	230	343	IPR000858	GO:0048544(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00038	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr29:719629	Smso7g00054	Smso-Chr7:984166	dispersed
	Smso	Smso-Chr29:675869	Smso29g00038	Smso-Chr29:719629	proximal
	Smso	Smso-Chr29:719629	Smso29g00040	Smso-Chr29:738534	proximal