Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00651	ATGAGTAGTTGGAGGAGCCTGATTTTGAGAATCGGCGAGAAGTCGTCTGAATACGGCGGAGTAATCGATTTCAAAGACCACATTGACGCCTGTTTTGGTGCTGTTCGGCGGGAACTAGATCATTCCGAAGACGAAATCTTAACTTTTCTTCTCCAATGTTCAGAGCAACTGCCTCACAAGATTCCTCTGTATGGGACTTTGATTGGGCTATTGAATTTAGAAAATGAGGATTTTGTTAAGAAAATAGTGGAGAGTACGCAAAAGAGTTTGCAGGATGCACTCGACTCTGGAGATTGCAACAAAGTCCGTGTATCAATGCGGTTTCTAACTGTTTTGATGTGTAGCAAAGTGATCCAACCGAGCTCATTAGTGGTGATTTTTGAAACGCTATTATCGTCTGCTGCAACAATAGTGGATGATGAGAAAGGAAACACTTCATGGCAAGCCCGTGCTGATTTCTTCATAACTTGTATTCTTTCCTGCCTTCCTTGGGGTGGATCTGAACTTGTTGAGCAAATTCCTGAAGAAATTGAAAGAGTTATGGTTGGGATAGAAGCCTATTTAAGCATCAGAAGACACGTGTCTGATGTTGGTCTATCTGTGTTCGAGGATATCAACAAAATCAACAAACTTCATGTTGAACAGGATTTTGTGGAAGACTTGTGGAGTCGAATTCAAGATCTCTCCAAGAACAGCTGGAAACTTGAGAGTGTTCCAAGGCCACATCTTTTATATGAAGCACAGCTAGTAGCTGGGAAATCTCATGATTTTGGACCAATCATCTGTCAGGAGCAACCAGATACCCCTGTGGAACTTTCTAGACTCAATTTTGGTAGTCAAAAATACGAGGCAGAATTGAAATATCCTCAGAGAATACGAAGGCTCAATATATTTTCTGCTAGCAAAACTGAGGATTTACAGCCTATTGACCGTTTTGTTGTGGAAGAGTATTTATTGGATGTGCTCTTTTATTTAAATGGATGTCGAAAGGAATGCGCTGCATGCATGGTTGGTCTACCTGTTCCTTTCAGATATGAATATCTCATGGCCGAAACCATTTTTTCTCAGCTTCTTTTATTGCCTCAGCCACCATTCAAGCCCATATATTACACGCTTGTCATAATAGACCTTTGTAAGTCTCTTCCAGGTGCATTCCCTGCAGTTGTAGCTGGGGCTGTACGTGCCCTATTTGATAGGATAAGTGAGTTAGATATGGAGTGTAGGACACGTCTCATTCTTTGGTTCTCACACCACTTATCAAACTTTCAATTCATCTGGCCATGGGAAGAATGGGCCTATGTCTTGGAGCTTCCAAAATGGGCCCCACAACGTGTTTTTGTCCAGGAGGTTCTCGATAGAGAAGTCCGCTTATCATACTGGGACAAAGTGAAGCAGAGCATTGAAAGTACTCCAGCTTTGGAGGAGTTACTTCCTCCAAAAGGTGGTCCCGACTTCAGATACAGTTCAGATGATGGTGATAAAACTGAATATACACTTTCAAGGGAACTTAACAGTATGGTAAAAGGAAGAAAAACTGCACGTGATGTCATAATTTGGCTTGAAGAAAGCGTAACCCCAATCAATGGACTAGATGTTTCTCTAAGAGTAGTCGTTCAAACCCTTTTGGATATTGGATCAAAAAGCTTTACTCATTTGATTACCGTGTTAGAGAGATATGGACAAGTTATTGCCAAAATTTGTCCAAATGAAGAAACACAAATTATGCTAATATCAGAAGTCAGTTCATTTTGGAAAAATAGTGCTCAATCAACTGCCATAACCATCGACAGAATGATGGGTTATCGACTTATTTCTAATTTAGCTATTGTGAAATGGGTTTTTTCTCCATCAAATATTGACCTATTTCACACCACTGATCGTTTGTGGGAGATTCTCATAAATGCTCTTAATAAGACGTATAATCGTATTTCTGATCTAAGGAAAGAGATATCTCATTTGAAAAAGAGTGTTGTAAAAGCCGAGCAAATTGCAGCCACGGCTAAAGCTGAGCTGGATAATGCTGAAAAAAAGCTTATGCTTGTGGATGGTGAGCCTGTTGTTGGTGAAAATCCAGCTAGGATGAAACGTTTGAAATCAAATGCTGAAAAGACAAAAGAGAACGAGGTGTCTACTCGTGAGTCTTTAGAGTCAAAGGAGGCTCTTTTTGCACGAGCCCTTGAAGAAAATGAGGCCTTGTTTCTGTCTTTATACAAAAATTTCTTTGCTGTTTTGATGGAACGCCTCCATGAAACATTTGGAGAGAAAACTTTGGACCACGTGGGTGGTGATTCAGAAGCAATGGCTGTTGATGAAGAAGACACTTCTGCAATGGATACGGATAAAGAAAACGGAAATTCCAAGAGCAACGTCGGATATACCATTGGAGAGAAAGAACAATGGTGTTTATCAACTCTGGGTTATGTCAAGGCCTTTTCAAGGCAATATGCCTCTGAGATATGGCCACACATGGTTAAGTTAGAGGAGGAAGTAGTAACAGAAAGTGTGCATCCTCTGTTCAGAAAAGCAGTTTATTCTGGTTTGCGCCTGCACGGCGATCAATAA	2562	40.71	MSSWRSLILRIGEKSSEYGGVIDFKDHIDACFGAVRRELDHSEDEILTFLLQCSEQLPHKIPLYGTLIGLLNLENEDFVKKIVESTQKSLQDALDSGDCNKVRVSMRFLTVLMCSKVIQPSSLVVIFETLLSSAATIVDDEKGNTSWQARADFFITCILSCLPWGGSELVEQIPEEIERVMVGIEAYLSIRRHVSDVGLSVFEDINKINKLHVEQDFVEDLWSRIQDLSKNSWKLESVPRPHLLYEAQLVAGKSHDFGPIICQEQPDTPVELSRLNFGSQKYEAELKYPQRIRRLNIFSASKTEDLQPIDRFVVEEYLLDVLFYLNGCRKECAACMVGLPVPFRYEYLMAETIFSQLLLLPQPPFKPIYYTLVIIDLCKSLPGAFPAVVAGAVRALFDRISELDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLELPKWAPQRVFVQEVLDREVRLSYWDKVKQSIESTPALEELLPPKGGPDFRYSSDDGDKTEYTLSRELNSMVKGRKTARDVIIWLEESVTPINGLDVSLRVVVQTLLDIGSKSFTHLITVLERYGQVIAKICPNEETQIMLISEVSSFWKNSAQSTAITIDRMMGYRLISNLAIVKWVFSPSNIDLFHTTDRLWEILINALNKTYNRISDLRKEISHLKKSVVKAEQIAATAKAELDNAEKKLMLVDGEPVVGENPARMKRLKSNAEKTKENEVSTRESLESKEALFARALEENEALFLSLYKNFFAVLMERLHETFGEKTLDHVGGDSEAMAVDEEDTSAMDTDKENGNSKSNVGYTIGEKEQWCLSTLGYVKAFSRQYASEIWPHMVKLEEEVVTESVHPLFRKAVYSGLRLHGDQ	853

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00651	853	SMART	if4-15	5	229	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Smso29g00651	853	SUPERFAMILY	ARM repeat	294	478	IPR016024	-
	Smso29g00651	853	Gene3D	-	490	845	-	-
	Smso29g00651	853	Pfam	MIF4G like	497	818	IPR015174	GO:0016070(InterPro)
	Smso29g00651	853	Coils	Coil	698	718	-	-
	Smso29g00651	853	FunFam	Nuclear cap-binding protein subunit 1	3	269	-	-
	Smso29g00651	853	Pfam	MIF4G like	343	467	IPR015172	GO:0016070(InterPro)
	Smso29g00651	853	FunFam	Nuclear cap-binding protein	296	481	-	-
	Smso29g00651	853	PANTHER	CAP BINDING PROTEIN	4	848	IPR027159	GO:0000184(PANTHER)\|GO:0000339(PANTHER)\|GO:0000339(InterPro)\|GO:0003729(PANTHER)\|GO:0005634(PANTHER)\|GO:0005845(PANTHER)\|GO:0005846(InterPro)\|GO:0005846(PANTHER)\|GO:0006406(InterPro)
	Smso29g00651	853	Pfam	MIF4G domain	23	225	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Smso29g00651	853	Coils	Coil	636	684	-	-
	Smso29g00651	853	SUPERFAMILY	ARM repeat	2	295	IPR016024	-
	Smso29g00651	853	Gene3D	-	3	269	-	-
	Smso29g00651	853	Gene3D	-	295	481	-	-
	Smso29g00651	853	SUPERFAMILY	ARM repeat	482	843	IPR016024	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00651	K12882	nuclear cap-binding protein subunit 1

Event-related genes

Select	Gene_1	Gene_2	Event_name
	337153	Smso29g00651	Smso7g00501
	353854	Smso7g00501	Smso29g00651

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr29:9147485	Smso7g00501	Smso-Chr7:8305288	wgd