AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00681 ATGTCGGAGCACAGCACAGTTAGTACGGCCAGCGGCCCGGATTTTAACCTACCTGATGAGATTCTATCGGTCATCCCGGCGGATCCGTACGACCAGCTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTGGCGTCACGCGTTTCTAAACTGGAGGCGGAGGCAGGGAGGTTGAGGCATAAGTTGAACGAGAAGGATCGAGTTATAATGGAACTCGAAGAAAAAGTATCCGAACTTCAGCAGACATGTCATAATGTTCAGTTGCGGTTGCAGATTACGCTCGAGGATAATACGAAACTTGCGGAGGAGAGAGATTCGTTGGCTGTGACTACTAAGAAATTAGGGCGCGATTTAGCTAAGCTGGAGGCGTTCAAGCGACAATTAATGCAGTCATTGAACGAAAATGATTCAACTTCGGCAGCAACTGTAGATATAGGCACCTATGACCAATCTGCTCCCAAAGCTTTTCCGGTTAAAGGAGAAGAGACAAATGGCTATAGAAGGCACCATTCTTATAGTGGCTCTATTGATAGTGCAAACATACATGATGACGCCTCAAAGCTTGCTGGTCAAAGGTTTTCTGGGACACCGTATATCAGCACACATGTAACTCCAACTGCAACCCCCAAAACAATCTCTACAAGTGTGTCCCCTAGAAGGTATTCTGCTTCTGGTACTACATCCCCAACAAAAATTCAATATGAAAGTCGTACCACAATGTCATCATGGTACCCATCAAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGGGCCCCCGATACCAGGTCGTGCTGCTAAGATTGATGGAAAAGAGGTCTTCCGTCGAGCAAGGAGTCGACTATCTTATGAGCAATTCAGTGCCTTTTTAGCAAATATAAAGGAGTTAAATGCCCGGAAGCAATCTCGTGAGGAGACTTTGAGGAAGGCGGAAGAAATATTCGGTTCTGATAACAAGGATCTTTATCTATCATTTCAAGCTCTTCTAAATCGCAACAAACAATGA 1008 45.63 MSEHSTVSTASGPDFNLPDEILSVIPADPYDQLDLARKITSMALASRVSKLEAEAGRLRHKLNEKDRVIMELEEKVSELQQTCHNVQLRLQITLEDNTKLAEERDSLAVTTKKLGRDLAKLEAFKRQLMQSLNENDSTSAATVDIGTYDQSAPKAFPVKGEETNGYRRHHSYSGSIDSANIHDDASKLAGQRFSGTPYISTHVTPTATPKTISTSVSPRRYSASGTTSPTKIQYESRTTMSSWYPSSQQSSAGNSPPRGPPIPGRAAKIDGKEVFRRARSRLSYEQFSAFLANIKELNARKQSREETLRKAEEIFGSDNKDLYLSFQALLNRNKQ 335
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00681 335 Coils Coil 48 89 - -
Smso29g00681 335 PANTHER OS03G0659800 PROTEIN 14 333 - -
Smso29g00681 335 Coils Coil 294 314 - -
Smso29g00681 335 MobiDBLite consensus disorder prediction 197 255 - -
Smso29g00681 335 MobiDBLite consensus disorder prediction 197 266 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00681 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
337162 Smso29g00681 Smso7g00523
353863 Smso7g00523 Smso29g00681
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr29:9895362 Smso7g00523 Smso-Chr7:8657221 wgd