Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso7g00081 | ATGCTGGATGTGGATCGAAAATCGAATGAGAGTAGCAATGGTGGCGATCGAATAAAGAAGAACAAAAACAACAAATGGAAGCGGTGGGGAGTTATCACATCTGTGATTGCAGTTTTAGTTGCCGTGTATCTTGATCCATGGCACCATTTTCTCAGTTATTCATTCCTCCATAAATCCTCCATATGTTCTAAGGATACTTGTGAAAATACAGGCATAGTTGAGGAATGCTGTTGTGATTATGAGAGCGTTAATGATATTAATGGGGCAGTTTTACATCCCTTATTACAAGAGCTTGTTCAGACCCCTTTCTTTAGATACTTCAAGGTTAAGTTATGGTGTGATTGCCCGTTCTGGCCCGATGATGGCATGTGCCGCCTGCGGGATTGCAGTGTATGCGAGTGTCCAGAACATGAATTTCCAGAATCTTTTAGAAAGCCAAAAGATGACCCTGTGTGTCAAGAGGGAAAGCCTGAGGCTGCTGTTGACCGAACCCTAGATGCTAAATCGTTTAGAGGCTGGGTAGAAATTGATAATCCATGGACTCTGGATGATGAAACTGATAATGGTGAAATGACGTATGTAAATCTGCAACTGAATGCTGAACGTCATACGGGGTATACAGGGCCATCAGAAAGAAGAATATGGGATGCTATATACTCGGAAAATTGTCCAAGATATGCATATGGAGAGACGTGCCCGGAGAAGAAAGTACTATACAAACTAATATCTGGTCTACACTCCTCGATTTCTAGCCATATTGCTGCTGATTATCTCCTTGATGAGACTACCAATAAGTGGGGTTCAAATCTTCGATTGATGCATGATCGTGTCTTGAAACATTTTGATCGCGTGGAAAATTTGTACTTCACTTTCCTATTTGTTCTTAGAGCTGTGACAAAAGCAGCTTCCTATTTGGATCAAGCTGAGTATGACTCTGGTAACCATGTGGAGGATTTGAGAGCTCAATTCTTGATTCGACAACTGGTTCACGATTCTAAATTGCAAGATGCGTGTGCTCTTCCATTTGATGAGGCTGAACTGTGGCAAGGCCAAGGTGGGCCCATACTCAGGCAGCAGATTCAAAATCAATTTCGGAACATCAGTGCACTCATGGACTGTGTAGGGTGTGAGAAGTGTCGTCTTTGGGGAAAACTTCAAGTTCTTGGGCTTGGAACTTCATTACAAATTCTCTTCTCTGTTGATGATCAGGGAAACCCGGACCCACACCTGCAGTTACAGAGAAATGAAGTGATTGCTCTAATTAATCTACTAAATCGGCTATCGGAATCTCTTATATTTGTTACCAAAACGAGAGATACGGGTGCTATAAGCCGTCTTGCTAACGAAATCGGTTTAATTCGCAAACAATGGGGATCATCAATAGCTCATTGGTACAGCTTTGCTGCTAACAGTTCATCTTTTTTTTGGCTTTAA | 1434 | 41.98 | MLDVDRKSNESSNGGDRIKKNKNNKWKRWGVITSVIAVLVAVYLDPWHHFLSYSFLHKSSICSKDTCENTGIVEECCCDYESVNDINGAVLHPLLQELVQTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEHEFPESFRKPKDDPVCQEGKPEAAVDRTLDAKSFRGWVEIDNPWTLDDETDNGEMTYVNLQLNAERHTGYTGPSERRIWDAIYSENCPRYAYGETCPEKKVLYKLISGLHSSISSHIAADYLLDETTNKWGSNLRLMHDRVLKHFDRVENLYFTFLFVLRAVTKAASYLDQAEYDSGNHVEDLRAQFLIRQLVHDSKLQDACALPFDEAELWQGQGGPILRQQIQNQFRNISALMDCVGCEKCRLWGKLQVLGLGTSLQILFSVDDQGNPDPHLQLQRNEVIALINLLNRLSESLIFVTKTRDTGAISRLANEIGLIRKQWGSSIAHWYSFAANSSSFFWL | 477 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso7g00081 | 477 | SUPERFAMILY | ERO1-like | 78 | 439 | IPR037192 | - | |
| Smso7g00081 | 477 | PANTHER | ERO1-RELATED | 33 | 440 | IPR007266 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(InterPro)|GO:0015035(PANTHER)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Smso7g00081 | 477 | Pfam | Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | 91 | 431 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso7g00081 | K10950 | ERO1-like protein alpha [EC:1.8.4.-] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 148166 | Smso18g01568 | Smso7g00081 | |
| 154167 | Smso7g00081 | Smso9g00685 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:91012577 | Smso7g00081 | Smso-Chr7:1685084 | wgd | |
| Smso | Smso-Chr18:73663253 | Smso7g00081 | Smso-Chr7:1685084 | wgd | |
| Smso | Smso-Chr25:15980147 | Smso7g00081 | Smso-Chr7:1685084 | wgd | |
| Smso | Smso-Chr29:1777780 | Smso7g00081 | Smso-Chr7:1685084 | wgd | |
| Smso | Smso-Chr7:1685084 | Smso9g00685 | Smso-Chr9:15968957 | wgd |