Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Soca5g05102	ATGGCACCTCCTTCCGGCCGCGGTGACAACAATGTCGTTGTTTCATCAAACATAAAGCTTGAGAGGCTTCTTAGCATGAAAGGTGGCAAAGATGAAGCCAGTTATGCCAACAACTCTCAAGCCCAGGCAAAACATGCTCGGTCAATGCTGCATCTCTTAAAGGAAACACTTGACGGTGTTGAGTTAAGCTCCCCCGAAACACCATTTGTGGTTGCGGATCTTGGTTGTTCAAGTGGAAGCAACACCATCTTTATAGTCAACGTCATTATCGAACACATCACCAAGCGATACGAGGCGTCCGGTTACTCGGATGTACCAGAGTTTTCGGCTTTCTTTGCGGACCTTCCTTCCAATGACTTCAACACACTCTTCCAGCTACTACCACCACTGGCTAACCAGGACGTGGGCAGCATGGAAGAGTGTCTGGCCTCCACAGGCCATCGCTCTTTCTATGTTGCTGGCGTCCCAGGCTCTTTCTATCGGAGGTTGTTCCCCGCGAAATCAATTGATGTTTTCTACTCAGCATTTTCCTTGCATTGGCTTTCTCAGGTACCAGAAAGTGTAATAGAGAAATCATCAAAGGCGTACAACAAGGGGAAAATATATATTCAAGGTGCGAATAAAATAACAGCAAATGAATACAAGAAACAATTTCAAACAGATCTGGCAGGATTTCTAAAAGCGAGATCAAAAGAGATGAGAAAAGGTGGGTCAATGTTTATTGCGCTATTGGGGAGGACATCAGAGGATCCCACAGACCAAGGGACTAATAACAAGCGAGAAGCGAGATGA	792	45.83	MAPPSGRGDNNVVVSSNIKLERLLSMKGGKDEASYANNSQAQAKHARSMLHLLKETLDGVELSSPETPFVVADLGCSSGSNTIFIVNVIIEHITKRYEASGYSDVPEFSAFFADLPSNDFNTLFQLLPPLANQDVGSMEECLASTGHRSFYVAGVPGSFYRRLFPAKSIDVFYSAFSLHWLSQVPESVIEKSSKAYNKGKIYIQGANKITANEYKKQFQTDLAGFLKARSKEMRKGGSMFIALLGRTSEDPTDQGTNNKREAR	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Soca5g05102	263	Gene3D	Vaccinia Virus protein VP39	43	259	IPR029063	-
	Soca5g05102	263	Pfam	SAM dependent carboxyl methyltransferase	65	257	IPR005299	GO:0008168(InterPro)
	Soca5g05102	263	PANTHER	S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN	24	254	IPR005299	GO:0008168(InterPro)\|GO:0008757(PANTHER)\|GO:0032259(PANTHER)
	Soca5g05102	263	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	19	257	IPR029063	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Soca5g05102	K18848	indole-3-acetate O-methyltransferase [EC:2.1.1.278]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Soca	Soca-Chr5:69229611	Soca6g03162	Soca-Chr6:63387214	dispersed
	Soca	Soca-Chr5:69229611	Soca5g05102	Soca-Chr5:69229611	tandem