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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Taer4g02410 ATGACAACTTCAACAAATCTCCTTCTTCTTCTTTTATTCATCTCCTTCATGTTTCTTCATCCGGCCTCCGCCGGCCTAACCGACATCAACTGGATGTCGAATTCAGGAGCCTGCACGGGTTCGATTGCCGAGTGTTTGGGTGGAGAAGAATTTGTGATGGAATCGGAAAGCACGAGGCGTATACTAGCTACAACGCGCTATATTAGCTATGGCGCGCTACAAGGGAACAATGTCCCGTGTTCGCAACGAGGTGCGTCGTATTATAATTGTCAATCGGGTGGTCAGGCTAATCCTTATCAACGTGGTTGTAGTACAATTACTCGTTGCAGACGTTGA 336 47.32 MTTSTNLLLLLLFISFMFLHPASAGLTDINWMSNSGACTGSIAECLGGEEFVMESESTRRILATTRYISYGALQGNNVPCSQRGASYYNCQSGGQANPYQRGCSTITRCRR* 112
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Taer4g02410 111 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 8 111 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
Taer4g02410 111 Pfam Rapid ALkalinization Factor (RALF) 49 111 IPR008801 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Taer4g02410 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Taer Taer-Chr3:76753488 Taer4g02410 Taer-Chr4:54305594 dispersed
Taer Taer-Chr4:54305594 Taer7g01253 Taer-Chr7:8345122 dispersed
Taer Taer-Chr4:54305594 Taer6g00802 Taer-Chr6:5475930 wgd