AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tamo4g02121 ATGGCTTTCACAGTAATCCCCAATCTCTCTCCTCCATCTTTCACTCGCCTTCATCTCCATAAATCTCAATCTTCACCTTCACCTTCACCTTCGTCGCATTCCGTAGCTCATAATATCCACGGCGGTGGTTTACAATCCTGCGTGGAATCTCCGCCGGTACGTGTCAGGGTATCTCCGCCGACGGATCCTCGCCATGACTTCTACGTCAATCTCGGCTTAGCTGTTCGCACTCTCCGCCATGACTTACCTCTCATCTTCTCCACAGATCTGAATTACGAAATCTACAGAGATGACATCACGTTAGTTGATCCGCTCAACACCTTCACCGGAATCGAAAACTACAAGCTCATCTTCCGAGCATTACGATTTCACGGCCGGATCCTCTTCAAGGACATCTCGCTCGAGATTTTTAGGGTTTGGCAGCCGTCGGAGAATCTGATTTTGATCCGGTGGAACCTCAAGGGCACTCCTCGCGTCCCCTGGGAAGCTAAAGGCGAGTTCCAAGGGACTTCTCGCTACAAACTCGATAGAAACGGGAAAATCTACGAGCATAAAGTCGATAACTTAGCGTTCAATTTCCCACGGCAGCTGAAACAACCGGCGGTTTCTGTATTTGATCTGGTGGCCGCTTCTCCTCCGGCAACTCCTAATCCTACTTTCTCATGGAATTCTTCTACCTACTCATCTTCGTGGCTAGATTTCTATCGTGCAGTTAAGAACACACTGGATCCTAGCGAAGACTATTCAGGTTTACTAGATTCACAACTAGTTGCCACTTGTTTACAGTGA 789 48.29 MAFTVIPNLSPPSFTRLHLHKSQSSPSPSPSSHSVAHNIHGGGLQSCVESPPVRVRVSPPTDPRHDFYVNLGLAVRTLRHDLPLIFSTDLNYEIYRDDITLVDPLNTFTGIENYKLIFRALRFHGRILFKDISLEIFRVWQPSENLILIRWNLKGTPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPRQLKQPAVSVFDLVAASPPATPNPTFSWNSSTYSSSWLDFYRAVKNTLDPSEDYSGLLDSQLVATCLQ 262
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tamo4g02121 262 Gene3D - 87 201 - -
Tamo4g02121 262 PANTHER RIKEN CDNA 2310061I04 GENE 23 209 IPR018790 -
Tamo4g02121 262 MobiDBLite consensus disorder prediction 16 36 - -
Tamo4g02121 262 SUPERFAMILY NTF2-like 89 185 IPR032710 -
Tamo4g02121 262 Pfam Uncharacterized conserved protein (DUF2358) 74 184 IPR018790 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tamo4g02121 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tamo Tamo-Chr2:20741789 Tamo4g02121 Tamo-Chr4:34456809 dispersed
Tamo Tamo-Chr4:34456809 Tamo6g03852 Tamo-Chr6:85552275 dispersed