AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00381 ATGTTTTGCTGGACTGGACTGTTCTGTCCATGTGTGCTGTTTGGGCGTAATGTTGAAAGCTTGAAAGAAGATGTCCCTTGGACCAAGCCATGCATTTGTCATGCCATTTTTGTTGAAGGTGGCATGGCTCTTGCAGCAGCAACAGCAGTCTTCCATGGTGTTGATCCAAGGACATCATTTCTCATCTGTGAGGGTTTGTTATTTGCTTGGTGGATGTGTGGCATCTATACTGGTCTCTCTCGACAATCATTACAGAAGAAATATCATCTCAAGCCAGTTGCACTTTGCACTGGTTTGTTAGCTGACCTCATGGCACAAAGACATAGCCGAGCCACCAAAATTTTGGGTTTGGTACCCCGAAAGAACCAACTGGGTATCACTTTTTTTCGTCCGACACAGCTAATGGTTGTTCTGTTCTCTGTTTGTGGACACATTCTTCCTACTGTGCAGAACTCTCCCTGTGACCCATGCATGGTTCACTGCTGCATGCACTGGTGTGCCTTGTGTCAGGAGCATAGAGAGATGAAGGGACGTCTCTCCGATAATGTTGTCATGCCGATGACCATAGTCAATCCTCCACCAGTGCAAGAGATGAGTGCAAGTGAGAACCAGGAGCCTACCCCATCCTCCGGAAACGGTGTTGAACACACTACTTTGGAGATGCAAGCTTTGTAA 675 46.96 MFCWTGLFCPCVLFGRNVESLKEDVPWTKPCICHAIFVEGGMALAAATAVFHGVDPRTSFLICEGLLFAWWMCGIYTGLSRQSLQKKYHLKPVALCTGLLADLMAQRHSRATKILGLVPRKNQLGITFFRPTQLMVVLFSVCGHILPTVQNSPCDPCMVHCCMHWCALCQEHREMKGRLSDNVVMPMTIVNPPPVQEMSASENQEPTPSSGNGVEHTTLEMQAL 224
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00381 224 Pfam PLAC8 family 3 92 IPR006461 -
Tesi1g00381 224 PANTHER DUF614 FAMILY PROTEIN-RELATED 3 181 IPR006461 -
Tesi1g00381 224 MobiDBLite consensus disorder prediction 194 224 - -
Tesi1g00381 224 NCBIfam PCR-CNR family Cys-rich domain 2 101 IPR006461 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00381 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr1:7593364 Tesi1g00920 Tesi-Chr1:20951918 wgd
Tesi Tesi-Chr1:7593364 Tesi21g00652 Tesi-Chr21:13700601 wgd