Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tesi1g00387	ATGACGAGGAAGTGCTCTCATTGCAGTCACAATGGGCATAATTCGAGAACTTGTCCGAACAGAGGGGTTAAGATCTTCGGGGTACGATTTACGGATGGATCGATCAGGAAGAGTGCTAGTATGGGGAATCTGACGCATTACACCGGATCAAGCAACAATAACCCCCACAACAGCTACAATCCTGGGTCTCCGGGAGAGACGCCGGAGCACGGTGCGGCTGCTGACGGTTATGCTTCGGAGGATTTCGTCCAGGGATCTTCGTCGAGCTGCCGCGAACGGAAGAAAGGTGTGCCATGGACTGAAGAGGAACACAAGATGTTTCTACTTGGTCTGCAGAAGCTTGGGAGAGGTGATTGGCGTGGGATAGCACGAAATTATGTTATATCCAGGACACCCACTCAGGTAGCTAGCCATGCCCAGAAATATTTTATCAGGCAAACCAATGTGTCCCGGAGAAAAAGACGGTCCAGCCTGTTTGATATGATAGCGGATGAATCAGCTGACACGCCAGTTGTACCACAGGAGCTCTTCCCCATCAGCCATCCACAAGCTGAAACACAAAGAAACAACCCGTTGCCAGCTACTCCAGCTCTGGATGAAGAATGCGAATCAATGGATTCTACTAACTCTAATGATGGAGAGCCTGTCCCTCCAAAGCCAGAGAGCTCACAATGCAGTTACCCAGTCATATTTCCGGCTTATTTCTCACCATTTTTTCCATTTTCTTTCCCATTTTGGCCGGGATACACTGCAGAAGGCGCAACAAAAGAGACACATGAGGTGGTTAAGCCCACAGCAATACATTTAAAGAGTCCAATCAATGTTGATGAGCTGGTGGGCATGTCACAACTGAGCCTGGGGGAATCCCTTGGTGATGCGGAGCCCTCGTCTCTCTCTCTGAAGTTGCTTGAAGGGTCTACTAGGCAATCGGCGTTCCATGCCAGCGCTGCCACGGGCAGCTCAAGCATGAACTCTAGCAGCAGCCCAATCCATGTACTCTAG	1002	50.2	MTRKCSHCSHNGHNSRTCPNRGVKIFGVRFTDGSIRKSASMGNLTHYTGSSNNNPHNSYNPGSPGETPEHGAAADGYASEDFVQGSSSSCRERKKGVPWTEEEHKMFLLGLQKLGRGDWRGIARNYVISRTPTQVASHAQKYFIRQTNVSRRKRRSSLFDMIADESADTPVVPQELFPISHPQAETQRNNPLPATPALDEECESMDSTNSNDGEPVPPKPESSQCSYPVIFPAYFSPFFPFSFPFWPGYTAEGATKETHEVVKPTAIHLKSPINVDELVGMSQLSLGESLGDAEPSSLSLKLLEGSTRQSAFHASAATGSSSMNSSSSPIHVL	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tesi1g00387	333	MobiDBLite	consensus disorder prediction	202	217	-	-
	Tesi1g00387	333	MobiDBLite	consensus disorder prediction	41	73	-	-
	Tesi1g00387	333	SMART	sant	95	145	IPR001005	-
	Tesi1g00387	333	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	94	146	IPR006447	GO:0003677(InterPro)
	Tesi1g00387	333	MobiDBLite	consensus disorder prediction	41	64	-	-
	Tesi1g00387	333	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	91	147	IPR017930	-
	Tesi1g00387	333	Pfam	Myb-like DNA-binding domain	97	143	IPR001005	-
	Tesi1g00387	333	MobiDBLite	consensus disorder prediction	313	333	-	-
	Tesi1g00387	333	FunFam	transcription factor MYB1R1	97	148	-	-
	Tesi1g00387	333	PANTHER	TRANSCRIPTION FACTOR KUA1	1	282	IPR052245	GO:0009723(PANTHER)\|GO:0009739(PANTHER)
	Tesi1g00387	333	MobiDBLite	consensus disorder prediction	180	222	-	-
	Tesi1g00387	333	SUPERFAMILY	Homeodomain-like	93	148	IPR009057	-
	Tesi1g00387	333	ProSiteProfiles	Myb-like domain profile.	91	143	IPR001005	-
	Tesi1g00387	333	CDD	SANT	98	143	IPR001005	-
	Tesi1g00387	333	ProSiteProfiles	SANT domain profile.	99	147	IPR017884	-
	Tesi1g00387	333	Gene3D	-	97	149	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tesi1g00387	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Tesi	Tesi-Chr15:34928921	Tesi1g00387	Tesi-Chr1:7720109	dispersed
	Tesi	Tesi-Chr1:7720109	Tesi4g00309	Tesi-Chr4:6810504	dispersed
	Tesi	Tesi-Chr1:7720109	Tesi1g00905	Tesi-Chr1:20597434	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Tesi	Myb_DNA-binding	3.3e-11	CL0123		TF	MYB-related