Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi1g00882 | ATGGCAAAGGAATCGAGCAGGAAGTGTTCTCATTGTGGCAATAACGGTCATAACTCAAGAACATGCAATGAAAAAGTGGGTATGAAGCTTTTTGGTGTGAAAATTTTGACACACAGAGGAGATGAATCGATTAAAAAGAGCTTCAGTATGGGAAATCTGCAATCATGCGTGATCGATCAAAACGCCGGCGATCCTGGGTATCTCTCCGACGGGCTCATTCATTCCAGAAGAGCTTCACATGAGAGGAAGAAAGGGGTGCCATGGACAGAGGAAGAACACCGAACTTTTCTAGCAGGATTGGAAAAGCTTGGGAAAGGTGACTGGCGAGGAATTTCAAGAAACTTTGTGACCAGCAGGACTCCAACCCAGGTGGCCAGCCATGCTCAGAAGTATTTTCTCAGGCAGACTGCCTCCAATAAGAAGAAGCGTAGAGCGAGCCTCTTTGACGTGCCAGTTAGAGACCCTGCTCCAACACTGCAAATTGCCCCGGCTTTACCTATCGAAGTCCATGAACGGCTTGGTACCTCGGCTCAAATTACAACCCAAGTAGCAAATCTCGGCTTGGAATCTTCCCCATTTATACCCGTGGCTGCAAATTGTGGTGTTCCCAATATTCATGGGATTCCATACATGGTAAAGAACCTACCTGAATATCTTCACTTCCTGCATTTTGATGAATTTGAACAAGGAGTAAAGACTCCATTACTTACAAACTTAAATGAGGTGGAAGGAGTCTCCAGTGGGACGCTGAACTACCCGGCAGCTAAAATCTTCCCAGCTGTATCGTTCGTCCCAGTAATGAATTTTCCCAACCAGGATTATGCTTATCTAGCTAAAAGCTACAATTACTTTGATACTTGCTCTCCAATTGCTTCCCAAGCATCCAGCAATCCATTGGCACAATCAGTCCCACATGGCTCATCTCAGGCAGAACCCGGGACTTCATCGACTGAAAGCACTGATTTGGAGCTTAGTATTGCACCACCTCGTACACACAATGCAACCAAGTTGCGTTCTCGGCCATCAAATTTTGGTGGGGCAATTAGGGTGGTCTGA | 1056 | 46.12 | MAKESSRKCSHCGNNGHNSRTCNEKVGMKLFGVKILTHRGDESIKKSFSMGNLQSCVIDQNAGDPGYLSDGLIHSRRASHERKKGVPWTEEEHRTFLAGLEKLGKGDWRGISRNFVTSRTPTQVASHAQKYFLRQTASNKKKRRASLFDVPVRDPAPTLQIAPALPIEVHERLGTSAQITTQVANLGLESSPFIPVAANCGVPNIHGIPYMVKNLPEYLHFLHFDEFEQGVKTPLLTNLNEVEGVSSGTLNYPAAKIFPAVSFVPVMNFPNQDYAYLAKSYNYFDTCSPIASQASSNPLAQSVPHGSSQAEPGTSSTESTDLELSIAPPRTHNATKLRSRPSNFGGAIRVV | 351 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi1g00882 | 351 | ProSiteProfiles | Zinc finger CCHC-type profile. | 7 | 24 | IPR001878 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
| Tesi1g00882 | 351 | ProSiteProfiles | SANT domain profile. | 88 | 136 | IPR017884 | - | |
| Tesi1g00882 | 351 | CDD | SANT | 87 | 132 | IPR001005 | - | |
| Tesi1g00882 | 351 | FunFam | transcription factor MYB1R1 | 86 | 137 | - | - | |
| Tesi1g00882 | 351 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 80 | 136 | IPR017930 | - | |
| Tesi1g00882 | 351 | MobiDBLite | consensus disorder prediction | 295 | 326 | - | - | |
| Tesi1g00882 | 351 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 83 | 135 | IPR006447 | GO:0003677(InterPro) | |
| Tesi1g00882 | 351 | Pfam | Myb-like DNA-binding domain | 86 | 132 | IPR001005 | - | |
| Tesi1g00882 | 351 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 6 | 166 | IPR052245 | GO:0009723(PANTHER)|GO:0009739(PANTHER) | |
| Tesi1g00882 | 351 | Gene3D | - | 86 | 137 | - | - | |
| Tesi1g00882 | 351 | SUPERFAMILY | Homeodomain-like | 82 | 136 | IPR009057 | - | |
| Tesi1g00882 | 351 | ProSiteProfiles | Myb-like domain profile. | 80 | 132 | IPR001005 | - | |
| Tesi1g00882 | 351 | SMART | sant | 84 | 134 | IPR001005 | - | |
| Tesi1g00882 | 351 | MobiDBLite | consensus disorder prediction | 295 | 351 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi1g00882 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr1:19878059 | Tesi4g00132 | Tesi-Chr4:3128386 | dispersed | |
| Tesi | Tesi-Chr1:8083313 | Tesi1g00882 | Tesi-Chr1:19878059 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Tesi | Myb_DNA-binding | 5.3e-11 | CL0123 | TF | MYB-related |