AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tesi1g00924 ATGGATTATGATGGCCATGATTTTCAAAGTCAGAATTTTCTGTTAGCTAGTGAAGAGAACACCAAATTCCCTCCAGGTTTACACTCGGATGCTCTTCCCAAGTTTGATCTGGATGACAGCCTTCAGATCCACCTAAGGTTTGATACTTTGGTTGAGAAAGAAGTTTTACTTGGCATCCAAAGTCAAGAAGAAGACCACTGGATTGAGGATTTTTCACGGGTGAGTAGTGGAATAGAATTTCGTTCAAGTGCTATGGAACCTTGCTCTATTTCAAGGCATAACAATGTTTGGTCTGAGGCCACTTCCTCCGAATCTGTTGAAATGCTACTGAACTCTGTTGAGCAGAATGAAATGATCACTGGACAAACTATTATTGAGGCGTCGGATGCCTGTGATGAACCAGGTGGCGAAACTAACCAAATGGAACCTGGTTTGAAGCAAGATGGAACCATTCTGTCTAAGATAGGGGTTGTTGTAGATACTGGCCCTGCATTACCACCTGATAAATGTTTGGACAAAATTTCTGGGTTAAATAAGGATGAAGGAGTTGAGCTGCCTCAGGTTGAAATGATCTCACAAACTCATGAAGATGAAAATTTTGGACATGAAAGTCCAAGAGACTTGGATCTAAGTTCTGCTAGTAAAAAGTGTGGCTTGCCAATGACCGAGGAGAATATGCTAATTGATATAAAAATTGATGATGCAAACCAAAGGGAAGGTAGTCCTTCGTCTGATGGATCTCTGCATAACAGGACACAAGACGATTCTACCCCTTCTGAGATGGCAATGCCTGAGCAGAATATTCTTGCAAGTGTTGGGGGGTTGAACAATCAAGAGGCCGAACAGCAGGTAACTGATTCCACTTTTGAGAATGCAGATGATTTACAAAAATATGATGATGAGATAGGGGTGGAACACCAGGTTCTGAGCAAGGAGGCTCAGATAGATGATCGGAATTGTGAAGGAAATGTGGTTGAAAATAGTATCAAGAATGCAGAGAAGCCCTTCAGACTGGCACCGAAGATGGGTTCACCAGTTCAAGGGGTAGAAGGAAATGCAGGTGAAACTAGTATCAATAGTGTGGTGAATCTTTCTAGTTTGGCATCAAAAGCGGATTCAATGGTGCAGATAGCAGGGGGATTCAGTGAGGATTTATGTTCAGAGAGCTCTGTGCTGGTCAGTAAATTTCAAGTTGGGGTTGCGTCCAAAGACACTGAGATGGATGATCAGTTTATAGAAGATACACATGAGGCATTTCTTGCAGTGGTGGAAGGGGTTAGTAATTTTGAAGGGCATGCTGTTGAGGTTAGCAAGAGTGCTGCAGGAATTCGTACCAGCCCAGAGGTGAGGATGGATAATCTAGTGCATATAACACATGAACATAACAATGCCTTATCTTTTGAGAAACAGGAGAATGTTGTAGAAATTGATGGTCACCAGCTGGAAAGTGGGAAATCAGTCAGTAATTCTGAGACATCTCTGTTGACTGTGGAAGACTTTAAACTTTTTGAAGGCCAGTGTGATAGTAGCAACAATAGTCAATTGGGAAAGCTTTCTATTTTGACGGTGGAGGTGAGTTCTTCAGCTAACATAATTCATGAAACACGAGCAACTGAAAACATAAAAGATGGCCATGATGGTTTGGGTGTTCATGGAGAAGACTTCAATGTGGAGGATCACATATCATCATCCGAGCGGGCTGAGTGCACGGATACATGCAAAAGAAATGTAGTCATTGGGCCGACTGATGTTCATAATAATCACCCAGATGTTTCTGTTCTTGATAAGGTGAATGCAGGGCTACCTCCTTGTGCTAGGAATGCGAATTGTGAGATTGATGGTTATCTTATCGTGGAGAATAGGTTAAAATCCTCAACTCTAGGTCAAAGTTCCGTGAAGACAGAGATGACAGTTTATGAACCACCATCTGAGGAGACTGTTGGAGGTGAACCAGCGTCAACTGGTGTTGTATTGGATGTTACCAACTTGGCATCACCTGAGAAATCGGATGGTGTTGATCAGGTTCTTTCTGTGAATGGTGTTGCCTCGGATGAAGTTATTGAGCGCACGGAGGATGGAAAATTACCTTTACTTGCAGGGGATTTTACTAATTTGAATAGAAAGGAAGAATCTGTAACTAAAATTGCCACAGAACCAAGTTTATTGGCCCTGAAGGAGTGCTCTCAAATGGCAAGTGAATCAGTTCCTGTTTCTGTATCTGCACAATGTGCTTTTCATGAAAATACTGGACAGCTGCTATGCAAGATAGTTGGTCCGCCTTCATCTTCTATGGAGACTGTTAGTATGACATGCCAGAATGAGCCTCAAGCAGTAACGGCTAACAAAGCCACTCAAGAATACTCTGAGGAGTTGGAGGTGTGTCCTATTCTCCATGATTCAAATACAAGAGAAAATGATGGTGCCGAAGTAGCAGGATTTCCACATGAAAAATATGAAGAATCATCCTTAAAAGTTGCAGGAACAACACCTAGCAATGGTGAGACACTCGCACAAACAAATCCTTCATCCTTGGAAGAATCTTCTCGCGACACAGACCGAAAAGATCAGGGAAACAATGAAGCTACCTCAGAATCTGGAGATGATAACAGCAAGCAGATTGTCCTCACAAGCACAGGAGGTAAGTTTAATTTTCTTGATCCGTTTTAG 2667 42.26 MDYDGHDFQSQNFLLASEENTKFPPGLHSDALPKFDLDDSLQIHLRFDTLVEKEVLLGIQSQEEDHWIEDFSRVSSGIEFRSSAMEPCSISRHNNVWSEATSSESVEMLLNSVEQNEMITGQTIIEASDACDEPGGETNQMEPGLKQDGTILSKIGVVVDTGPALPPDKCLDKISGLNKDEGVELPQVEMISQTHEDENFGHESPRDLDLSSASKKCGLPMTEENMLIDIKIDDANQREGSPSSDGSLHNRTQDDSTPSEMAMPEQNILASVGGLNNQEAEQQVTDSTFENADDLQKYDDEIGVEHQVLSKEAQIDDRNCEGNVVENSIKNAEKPFRLAPKMGSPVQGVEGNAGETSINSVVNLSSLASKADSMVQIAGGFSEDLCSESSVLVSKFQVGVASKDTEMDDQFIEDTHEAFLAVVEGVSNFEGHAVEVSKSAAGIRTSPEVRMDNLVHITHEHNNALSFEKQENVVEIDGHQLESGKSVSNSETSLLTVEDFKLFEGQCDSSNNSQLGKLSILTVEVSSSANIIHETRATENIKDGHDGLGVHGEDFNVEDHISSSERAECTDTCKRNVVIGPTDVHNNHPDVSVLDKVNAGLPPCARNANCEIDGYLIVENRLKSSTLGQSSVKTEMTVYEPPSEETVGGEPASTGVVLDVTNLASPEKSDGVDQVLSVNGVASDEVIERTEDGKLPLLAGDFTNLNRKEESVTKIATEPSLLALKECSQMASESVPVSVSAQCAFHENTGQLLCKIVGPPSSSMETVSMTCQNEPQAVTANKATQEYSEELEVCPILHDSNTRENDGAEVAGFPHEKYEESSLKVAGTTPSNGETLAQTNPSSLEESSRDTDRKDQGNNEATSESGDDNSKQIVLTSTGGKFNFLDPF 888
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tesi1g00924 888 MobiDBLite consensus disorder prediction 818 879 - -
Tesi1g00924 888 MobiDBLite consensus disorder prediction 846 861 - -
Tesi1g00924 888 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 1 861 - -
Tesi1g00924 888 MobiDBLite consensus disorder prediction 195 210 - -
Tesi1g00924 888 MobiDBLite consensus disorder prediction 239 260 - -
Tesi1g00924 888 MobiDBLite consensus disorder prediction 824 845 - -
Tesi1g00924 888 MobiDBLite consensus disorder prediction 236 260 - -
Tesi1g00924 888 MobiDBLite consensus disorder prediction 862 879 - -
Tesi1g00924 888 MobiDBLite consensus disorder prediction 195 214 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tesi1g00924 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Tesi Tesi-Chr6:27464335 Tesi1g00924 Tesi-Chr1:21024237 transposed
Tesi Tesi-Chr1:7531889 Tesi1g00924 Tesi-Chr1:21024237 wgd
Tesi Tesi-Chr1:21024237 Tesi21g00647 Tesi-Chr21:13511169 wgd