Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi22g00021 | ATGTCAGCAACCATCGACTCGAGGGTCGGGGTCGGAGGTGAGGTAGTGAGGGCTGACAAAAGCAGAGGTTGGGTAGTTCAGGGCCTGACCAATAAAGGCATGGGTCACGGTGATAGTGTGCTCATCAATAATGGTCTCAAGCGTGGGGGTCTCGCCGTCCATGACGTGCATATTCTGGTGGCGGAGATGGAAGCTTGTTTGCAAGAACTCAATAATGCAATTCCCGAACGTGAGGTTCTCATTGCTCTTGCAGAAAAGTTCAGTGCTTCATCAGAGCGAGCAGGAAAGATTATTGTGCAAATGAAGCAGGTGTGGAATTGGTTCCAGAATAAGAGATACGCGCAGAGGGCGAAATTGATTAAGGCTCCTGGGAAGCTCAGTGTGTCACCTATGCCTCGGGATGATTCAGTTCCAGTGAGAAATGTACATTCCATGCCGGTTTCTTTAGGAAGGAATGCTTCAGATAATAATACTCAGATGGAGTTTGAAGCCAAGTCAGCTAGGGATGGGGCATGGTATGATGTTGCGACCTTTATTTCTCATAGACTGTTTGAGACGGGTGATCCGTCATTGTTCCTCGTCTTTTCATGTCAATATGGTTGGCCATTTCAGGAAGTTCGGGTTCGATTTGCAGGATTTGAAGCAGAGGAGGATGAGTGGGTAAATGTGCGGAAGCATGTGAGACAACGATCACTTCCATGTGAAGCATCAGAATGTGTTGCAGTACTTCCCGGAGACCTTATACTTTGTTTTCAGGAAGGTAAGGAGCAGGCTCTTTACTTTGACGCTCATGTCCTTGACGCACAAAGAAGGAGACACGATGTAAGAGGATGTCGTTGTAGGTTTCTAGTGCGCTACGATCATGATCAGTCTGAGGAAATTGTGCCACTCAGAAAGGTATGTCGTCGTCCAGAGACTGATTACAGGTTGCAACAACTGCATGCTTTGAAGGAGACTGCATTAGGGGACCTGCGGAACATGGGGAAAGATCCTTCTCTGATCAGCACTTCAAGGGATATCATCAGTTCATCAAACGAAAAAATGCGAAAGCAACATAAAGTGGAAGGAAACACAGATGAGGTGGTCATGGTGACTCCCCTATCTCATGCCAAAGAGCCTGTAACCACAAAAACTACAATGACTGAAATGATGAAGGTTGAAATTGGTGGTTATAATACTGCGGAAACTCCAGATGCCCCTACAGGTGATGCCGGATTGACCATTGGCACAGTTTCCAGCTCTGTCACTTGCTATCCAGAAGGAAGTTAG | 1269 | 46.81 | MSATIDSRVGVGGEVVRADKSRGWVVQGLTNKGMGHGDSVLINNGLKRGGLAVHDVHILVAEMEACLQELNNAIPEREVLIALAEKFSASSERAGKIIVQMKQVWNWFQNKRYAQRAKLIKAPGKLSVSPMPRDDSVPVRNVHSMPVSLGRNASDNNTQMEFEAKSARDGAWYDVATFISHRLFETGDPSLFLVFSCQYGWPFQEVRVRFAGFEAEEDEWVNVRKHVRQRSLPCEASECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHALKETALGDLRNMGKDPSLISTSRDIISSSNEKMRKQHKVEGNTDEVVMVTPLSHAKEPVTTKTTMTEMMKVEIGGYNTAETPDAPTGDAGLTIGTVSSSVTCYPEGS | 422 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi22g00021 | 422 | Gene3D | - | 157 | 233 | - | - | |
| Tesi22g00021 | 422 | Gene3D | - | 234 | 306 | - | - | |
| Tesi22g00021 | 422 | Pfam | SAWADEE domain | 159 | 301 | IPR032001 | GO:0003682(InterPro) | |
| Tesi22g00021 | 422 | SUPERFAMILY | Homeodomain-like | 60 | 116 | IPR009057 | - | |
| Tesi22g00021 | 422 | PANTHER | PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 | 60 | 366 | IPR039276 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi22g00021 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr15:34678222 | Tesi22g00021 | Tesi-Chr22:2578726 | dispersed | |
| Tesi | Tesi-Chr21:33291058 | Tesi22g00021 | Tesi-Chr22:2578726 | dispersed | |
| Tesi | Tesi-Chr22:2578726 | Tesi19g00261 | Tesi-Chr19:5595236 | transposed |