AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tesi7g01022 | ATGGAGTTTTTAGGACAACCCAGATTCGAGATTGTAGGTATTGCAGTCGCTCTTGTTGCCATCAGCGCCGGTGCTGCCTATTTCTATCTCAGCAAGAAACCCAAAGGTTGCTTAGATCCCGAGAACTTCAAGGAGTTCAAACTTGTTAAACGCACTCAGCTCAGCCACAATGTGGCTGAGTTTAGATTTGCTCTTCCTACACCTACTTCGGTGTTGGGTCTTCCAATTGGACAACATATAAGTTGCAGGGGAAAGGATAGCCTTGGTGAAGAAATTATCAAGCCATATACCCCAACTACTTTAGATTCAGATGTTGGATACTTTGAACTAGTTATAAAGATGTATCCACAAGGAAGGATGTCCCACCATTTCCGCGAGATGCGTGAAGGCGATTACATGGCCGTAAAGGGACCCAAGGGGCGTTTCAAGTATCAACCTGGCCAAGTTAGAGCTTTTGGAATGCTTGCTGGAGGCTCTGGCATTACTCCAATGTTCCAGGTTGCAAGAGCGATATTAGAAAATCCAAAAGACAATACCAAGGTGCATCTTATCTATGCCAACGTCACATTCGAGGACATTCTTTTGAAGGAAGAACTGGATGGCCTTGCTCATAACTACCCAGACTGCTTCAAAGTTTTCTATGTTCTAAATCAGCCTCCAGAAGTTTGGAATGGTGGGGTTGGGTTTGTATCCAAGGAAATGATTCAGACCCACTGCCCGGCACCTGCTCCTGATATTCAGGTTTTGAGGTGCGGCCCACCACCCATGAACAAGGCCATGGCGGCTCACCTTGATGGCCTTGGTTATACGTCGCAGATGCAGTTCCAGTTCTGA | 834 | 46.28 | MEFLGQPRFEIVGIAVALVAISAGAAYFYLSKKPKGCLDPENFKEFKLVKRTQLSHNVAEFRFALPTPTSVLGLPIGQHISCRGKDSLGEEIIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMREGDYMAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMFQVARAILENPKDNTKVHLIYANVTFEDILLKEELDGLAHNYPDCFKVFYVLNQPPEVWNGGVGFVSKEMIQTHCPAPAPDIQVLRCGPPPMNKAMAAHLDGLGYTSQMQFQF | 277 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tesi7g01022 | 277 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 41 | 145 | IPR017927 | GO:0016491(InterPro) | |
| Tesi7g01022 | 277 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 16 | 277 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
| Tesi7g01022 | 277 | Pfam | Oxidoreductase NAD-binding domain | 154 | 260 | IPR001433 | GO:0016491(InterPro) | |
| Tesi7g01022 | 277 | FunFam | NADH-cytochrome b5 reductase | 135 | 277 | - | - | |
| Tesi7g01022 | 277 | FunFam | NADH-cytochrome b5 reductase | 36 | 135 | - | - | |
| Tesi7g01022 | 277 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 247 | 255 | IPR001709 | GO:0016491(InterPro) | |
| Tesi7g01022 | 277 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 153 | 172 | IPR001709 | GO:0016491(InterPro) | |
| Tesi7g01022 | 277 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 191 | 202 | IPR001709 | GO:0016491(InterPro) | |
| Tesi7g01022 | 277 | Gene3D | Translation factors | 34 | 133 | - | - | |
| Tesi7g01022 | 277 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 134 | 271 | IPR039261 | - | |
| Tesi7g01022 | 277 | Pfam | Oxidoreductase FAD-binding domain | 46 | 144 | IPR008333 | - | |
| Tesi7g01022 | 277 | SUPERFAMILY | Riboflavin synthase domain-like | 34 | 146 | IPR017938 | - | |
| Tesi7g01022 | 277 | PRINTS | Cytochrome B5 reductase signature | 153 | 172 | - | - | |
| Tesi7g01022 | 277 | PRINTS | Cytochrome B5 reductase signature | 94 | 101 | - | - | |
| Tesi7g01022 | 277 | PRINTS | Cytochrome B5 reductase signature | 247 | 255 | - | - | |
| Tesi7g01022 | 277 | PRINTS | Cytochrome B5 reductase signature | 130 | 144 | - | - | |
| Tesi7g01022 | 277 | PRINTS | Cytochrome B5 reductase signature | 72 | 83 | - | - | |
| Tesi7g01022 | 277 | PRINTS | Cytochrome B5 reductase signature | 191 | 202 | - | - | |
| Tesi7g01022 | 277 | Gene3D | - | 134 | 277 | IPR039261 | - | |
| Tesi7g01022 | 277 | CDD | cyt-b5-reduct-like | 46 | 277 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tesi7g01022 | K00326 | cytochrome-b5 reductase [EC:1.6.2.2] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Tesi | Tesi-Chr15:30582908 | Tesi7g01022 | Tesi-Chr7:23415919 | dispersed | |
| Tesi | Tesi-Chr24:7491729 | Tesi7g01022 | Tesi-Chr7:23415919 | dispersed | |
| Tesi | Tesi-Chr6:6291238 | Tesi7g01022 | Tesi-Chr7:23415919 | dispersed | |
| Tesi | Tesi-Chr13:20000116 | Tesi7g01022 | Tesi-Chr7:23415919 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Tesi1g01331 | . | 1 | 134 | NADPH P450 reductases gene family | AT5G53560 | 77.612 | 2.20e-79 | 228.0 | |
| Tesi6g00167 | . | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 38.132 | 2.00e-44 | 160.0 | |
| Tesi7g01022 | . | 35 | 281 | NADPH P450 reductases gene family | AT5G17770 | 85.425 | 2.90e-161 | 447.0 | |
| Tesi8g00907 | . | 1 | 134 | NADPH P450 reductases gene family | AT2G32720 | 77.612 | 3.91e-79 | 228.0 | |
| Tesi8g01251 | . | 4 | 138 | NADPH P450 reductases gene family | AT5G48810 | 44.828 | 8.16e-40 | 129.0 | |
| Tesi9g00836 | . | 71 | 120 | NADPH P450 reductases gene family | AT1G60660 | 82.0 | 2.20e-26 | 94.0 | |
| Tesi13g00767 | . | 36 | 281 | NADPH P450 reductases gene family | AT5G17770 | 86.992 | 1.29e-162 | 451.0 | |
| Tesi14g00404 | . | 22 | 134 | NADPH P450 reductases gene family | AT2G32720 | 82.301 | 5.98e-66 | 195.0 | |
| Tesi15g00487 | . | 41 | 281 | NADPH P450 reductases gene family | AT5G17770 | 40.541 | 1.54e-64 | 205.0 | |
| Tesi15g00693 | . | 1 | 120 | NADPH P450 reductases gene family | AT1G60660 | 46.667 | 1.86e-30 | 102.0 | |
| Tesi16g00307 | . | 1 | 134 | NADPH P450 reductases gene family | AT2G32720 | 78.358 | 1.28e-80 | 231.0 | |
| Tesi18g00384 | . | 1 | 134 | NADPH P450 reductases gene family | AT1G26340 | 67.91 | 8.49e-66 | 194.0 | |
| Tesi20g00831 | . | 29 | 134 | NADPH P450 reductases gene family | AT2G32720 | 75.701 | 7.56e-50 | 166.0 | |
| Tesi21g00084 | . | 1 | 134 | NADPH P450 reductases gene family | AT5G53560 | 75.373 | 1.68e-74 | 216.0 | |
| Tesi22g00849 | . | 1 | 134 | NADPH P450 reductases gene family | AT5G53560 | 81.343 | 6.97e-82 | 237.0 | |
| Tesi24g00102 | . | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 38.132 | 1.62e-46 | 160.0 | |
| Tesi24g00710 | . | 4 | 133 | NADPH P450 reductases gene family | AT5G48810 | 44.853 | 1.05e-36 | 121.0 |