AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g00967 ATGCTTAGGGCAGTTTTGTTGTTCGTCTTTTCGGTTTTGTATAGCTTCTTCCATTTTCAATTGGATACGGCGCTGTCCAAGGAGAAAGAGGAGGAGGGTGTTTGGGAAGTGAGAGGAGGCAAATGGCATAAGATAATCCCGGATTCTTCCAAGGACGAATTTCTTGTTGTTACACCTGGGATTGGAGCTGTTGGTGCTCCCAAGTCCTCGACTCTTCCCAATTTGTGGCTACAATGCAAGGAGCTCTTTCTGCGTTTGATGCTGCCGGAGGGCTTTCCACACAGCGTTACCTCGGATTACTTGGACTACACCCTATGGAGGGGTGTGCAGGGTGTTGCCAGCCAAATTAGCGGAGTCCTTGCCACCCAAGCCTTGCTTTATGCGGTTGGATTGGGGAAAGGGGCCATTCCGACTGCCGCTGCAGTCAATTGGGTACTCAAAGATGGAATCGGCTACCTCAGTAAAATCCTCTTGTCAAAATATGGCCGGCATTTTGATGTCCATCCCAAGGGTTGGAGGTTGTTTGCCGATCTTTTGGAAAATGCTGCCTATGGATTGGAGATATTGACTCCTGCCTTTCCTCATCAATTTCTCCTAATTGGTGCTGTTGCTGGAGCAGGACGATCAGCAGCTGCGTTAATCCAGGCTTCTACAAGGAGCTGTTTCTACGCTGGCTTTGCTGCTCAAAGGAATTTTGCTGAGGTAATTGCAAAGGGCGAGGCTCAAGGAATGGTGAGCAAATCCATTGGAATCATGCTTGGCATAGCATTAGCTAATTGCATAGGCTCCTCTGCACCTCTTTCCTTTGCTTCTTTTACTGTGGTAACTGCGGTCCATATGTTCTGCAATTTGAAGTCATACCAATCCATTCAATTAAGGACTTTGAATCCATACCGTGCAAGTTTAGTCTTCAGTGAATATCTGCTTAGTGGCCAAGTTCCTTCAATTAAGGAGGTTAATGAAGAGGAACCACTTTTTCCAGTTGTACCCCTTCTTAATGCAAAGCCTACTTATAAAGCACAATCAGCAGTACTATCCACTGAAGCCAAGGATGCAGCTGCTGAAATAGAGCGCCGGTTGCAGTTGGGATCCAAGCTCAGTGAGGTAGTTAGCAGCAAGGAGGATGTGCTTGCACTGTTTGATCTGTATAGAAATGAAGCTTATATTTTGACTGAGCACAAGGGACGATTTTTTGTGATACTTAAAGAAAGTTGCTCACCACAAGACATGCTGAAATCAGTGTTCCATGTCAATTATCTTTACTGGTTGGAAAGAAATGCAGGAATCATATCTATGGGTGCCTCTGATGACTGCAGACCAGGAGGCAGGCTGCAGATATCTTTAGAGTACGTGCAAAGGGAATTCAACCATTTAAAAAATGACAGCGAGTTTGTAGGTTGGGCCACTGATGGGCTCATTGCAAGGCCTCTGCCTAATAGGATCCGTCCGGGTCATATTGTGATTGGAGAGTTCTGGTTGGGAAATATAGAATGGTCAAACCTTGAGGCTGTGACCTGCCAAAGAAGGCAGGCTTGTGACTTCCTCTGGACGTGGTTGGGCGGCAATTGGAAGGTGCTGATCATTGAGTCGTGCCAAACAAAGCTGGGCAAATGA 1614 46.41 MLRAVLLFVFSVLYSFFHFQLDTALSKEKEEEGVWEVRGGKWHKIIPDSSKDEFLVVTPGIGAVGAPKSSTLPNLWLQCKELFLRLMLPEGFPHSVTSDYLDYTLWRGVQGVASQISGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGIGYLSKILLSKYGRHFDVHPKGWRLFADLLENAAYGLEILTPAFPHQFLLIGAVAGAGRSAAALIQASTRSCFYAGFAAQRNFAEVIAKGEAQGMVSKSIGIMLGIALANCIGSSAPLSFASFTVVTAVHMFCNLKSYQSIQLRTLNPYRASLVFSEYLLSGQVPSIKEVNEEEPLFPVVPLLNAKPTYKAQSAVLSTEAKDAAAEIERRLQLGSKLSEVVSSKEDVLALFDLYRNEAYILTEHKGRFFVILKESCSPQDMLKSVFHVNYLYWLERNAGIISMGASDDCRPGGRLQISLEYVQREFNHLKNDSEFVGWATDGLIARPLPNRIRPGHIVIGEFWLGNIEWSNLEAVTCQRRQACDFLWTWLGGNWKVLIIESCQTKLGK* 538
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g00967 537 PANTHER RUS1 FAMILY PROTEIN C16ORF58 32 482 IPR006968 GO:0009941(PANTHER)|GO:0010224(PANTHER)|GO:0032502(PANTHER)
Vivi19g00967 537 Pfam Vitamin B6 photo-protection and homoeostasis 78 309 IPR054549 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g00967 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr14:27837099 Vivi19g00967 Vivi-Chr19:18754506 dispersed