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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi19g01038 ATGATCAGGAAATTTTCTCCAGAGCTGTACTTGAAATGTCGGTTTACCACTTCCAAAGGCCACTTAGATCCATTTGATGGCCTCCATGTTGGTACATTTGGCCCTTATGGAACTGAGGTGGTACAACTGAGACTTAAATTTGGCCACTGGAATGAGGAGATGAGTTCTTTGAATATGTTGAGGTAG 186 42.47 MIRKFSPELYLKCRFTTSKGHLDPFDGLHVGTFGPYGTEVVQLRLKFGHWNEEMSSLNMLR* 62
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi19g01038 61 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 14 56 IPR044680 GO:0000304(PANTHER)|GO:0010343(InterPro)|GO:0042651(PANTHER)
Vivi19g01038 61 Pfam Cyclin D1 binding domain 18 55 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi19g01038 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Vivi Vivi-Chr17:9281674 Vivi19g01038 Vivi-Chr19:20595962 dispersed